👤 Jimmy Yu

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959
Articles
672
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Also published as: Yue Yu, Ruihao Yu, Yuyun Yu, Suchai Yu, Minli Yu, Zhuanyi Yu, Shiqin Yu, Qi Yu, X-Y Yu, Chong Yu, Chen-Lin Yu, Bilian Yu, Li Yu, Yongsheng Yu, Xiaoding Yu, Fengxu Yu, Xiafeng Yu, Qin Yu, Na Yu, Chi Yu, Shiyong Yu, Shuangjiang Yu, Wen-Wen Yu, Shan Yu, Youxin Yu, Meixin Yu, Xiaofeng Yu, Ruixin Yu, Zhe Yu, Meiping Yu, Ran Yu, Min Yu, Jia-Jia Yu, Yanping Yu, Junlong Yu, Wenhua Yu, Chengxiao Yu, Jiasheng Yu, Jiaying Yu, Yifan Yu, Kun Yu, Haitao Yu, X F Yu, Yingying Yu, Shasha Yu, Mohan Yu, Jiao-Jiao Yu, Fang Yu, Cong Yu, Dong-Ke Yu, Chung-Jui Yu, Zhi Yu, Xi-Yong Yu, Jingwei Yu, Minbin Yu, Chengcheng Yu, Xinbo Yu, Liqiang Yu, Haiqiong Yu, Di Yu, Kenneth H Yu, Yulong Yu, Jianyu Yu, Jiujiu Yu, Seong-Lan Yu, Quan Yu, Ning Yu, Jungeun Yu, Paul B Yu, Zengli Yu, Jingshuang Yu, Feiyan Yu, Wenjing Yu, Wenying Yu, Zhimin Yu, Senhai Yu, Sanshui Yu, Hongtao Yu, Gongxin Yu, A X Yu, Mu-Yao Yu, Chengli Yu, Shubin Yu, Shentong Yu, Siyuan Yu, Qing Yu, Yalan Yu, Feng Yu, Fei Yu, Si-Xun Yu, Aijun Yu, Weihong Yu, Hyeonseung Yu, Yongxin Yu, Jianjun Yu, Yingduo Yu, Hongyi Yu, Chuan Yu, Xiaolin Yu, Xue Yu, Yichen Yu, Qunli Yu, Sangho Yu, Hyeong Gon Yu, Yongchun Yu, Haibing Yu, Hong-Dan Yu, Shaokun Yu, J-L Yu, Jia-Yu Yu, Huahui Yu, Huihong Yu, Juemin Yu, Zhou Yu, Mingcan Yu, Keping Yu, Shihui Yu, Hai Yu, Xiaofei Yu, Nannan Yu, Haimiao Yu, Jiannan Yu, R H Y Yu, Yunxian Yu, Lixiu Yu, Hongping Yu, Shigang Yu, Qinghe Yu, Yuanshan Yu, Lu Yu, Yangyang Yu, Yaxu Yu, Ying Yu, Kaijie Yu, Jun Yu, Nancy Yiu-Lin Yu, Bi-Lian Yu, Guoqiang Yu, Ye Yu, Jiangning Yu, Bentong Yu, Mingyang Yu, H Yu, Hui-Ling Yu, L Yu, Xiaoqian Yu, Qiuyu Yu, Zhiguo Yu, Xinming Yu, Kenneth Yu, Zhijun Yu, Sung-Gon Yu, Teng Yu, Hailiang Yu, Dan Yu, Hai-Tao Yu, Wei-Ping Yu, Kuang-Hui Yu, Mengxi Yu, Tianxin Yu, Weijie Yu, Zhenxiang Yu, Haoyue Yu, Xiyong Yu, Linxiang Yu, Lissa X Yu, Zhuowei Yu, Shanshan Yu, Shuyun Yu, Rosie Yu, Yongfeng Yu, Tao Yu, Haiming Yu, Liqing Yu, Shiliang Yu, Caiguo Yu, Han Yu, Yanbing Yu, Chongjing Yu, Hsiao-Man Ivy Yu, Zeng Yu, Vionnie W C Yu, Zihua Yu, Yaxin Yu, Beibei Yu, Jia Yu, Jeffrey Yu, Yuan-Xun Yu, Xinxin Yu, Dingye Yu, Mengyuan Yu, Zhenghong Yu, Yijian Yu, Xuejing Yu, Shuping Yu, Xiao-Guang Yu, Rachel G Yu, Dian-Mei Yu, Xianguan Yu, Haopeng Yu, Guann-Yi Yu, Kyung-Sang Yu, Chun-Lei Yu, Tianlian Yu, Yu Yu, Jinha Yu, Yau-Hua Yu, Hannah Yu, Qinming Yu, Hongli Yu, Jiangkun Yu, Lihua Yu, Pan Yu, Hejiang Yu, Xihe Yu, Zongliang Yu, Liqin Yu, Caiyan Yu, Zhenbao Yu, Seong-Jin Yu, Y Q Yu, Sean Yu, Yaru Yu, Xiaoyan Yu, Qiangqing Yu, Fei-Hu Yu, Yeke Yu, Xijing Yu, Qiuliyang Yu, Boming Yu, Jiajia Yu, Shuang Yu, Debing Yu, Yanan Yu, Chong-Jen Yu, Jau-Song Yu, Qingyuan Yu, Zhenhua Yu, Tong Yu, Danny Yu, Jia-Xin Yu, Yanhao Yu, Likai Yu, Chang-Wei Yu, Jingping Yu, Haibin Yu, Zhengxuan Yu, Seung-Woo Yu, Pujiao Yu, Wenhao Yu, Site Yu, Rina Yu, Tianren Yu, Jeong Jin Yu, Ming-Zhen Yu, Chunlin Yu, Jiong Yu, Hui-Xia Yu, Ling Yu, Shouyang Yu, Xian-Feng Yu, Bao-Hua Yu, Yaqin Yu, Qiao Yu, Yau-Hei Yu, David Yu, Huan Yu, Dianke Yu, Wenjuan Yu, Meihua Yu, Lili Yu, Shaohong Yu, Yongchao Yu, Zhonghao Yu, Yuanhang Yu, Lijuan Yu, Eunsil Yu, Ke-Da Yu, Wenlong Yu, Songping Yu, Liangyu Yu, Sifei Yu, Lihou Yu, Jin-Mei Yu, Liuwen Yu, Wan Yu, Jia-Ray Yu, Minzhi Yu, Dahai Yu, Kebo Yu, Wen-Bin Yu, Mengjiao Yu, Guanqiao Yu, Shiyan Yu, Mi-Hee Yu, Kai-Yue Yu, Luoting Yu, Haiyi Yu, Rui Yu, M Y Yu, Liping Yu, Ru-Tong Yu, Changjie Yu, Kai-Jing Yu, Hong Yu, Zhuo Yu, Jingxian Yu, Shaojie Yu, Hui Yu, Xiao Yu, Dandan Yu, Chang-En Yu, Jinming Yu, I-Shing Yu, C Yu, Dae-Yeul Yu, Wenfeng Yu, Pengcheng Yu, Yanbo Yu, Ming Yu, Shoukai Yu, Shijin Yu, Dah-Shyong Yu, Hang Yu, Chengyong Yu, Jinlong Yu, Yongjun Yu, Min-Hua Yu, Sixiang Yu, Zheng Yu, Dianmei Yu, Xiping Yu, Lingxue Yu, Xiaosi Yu, Wancong Yu, Sung-Liang Yu, Chuwei Yu, Rutong Yu, Qijun Yu, Huimei Yu, Jianxiong Yu, K Yu, Chunquan Yu, Jiao Yu, Ying-Nan Yu, Lianbo Yu, Zhiyin Yu, Meiling Yu, Xintao Yu, Weifei Yu, Guran Yu, Yiming Yu, Liyan Yu, Xiaofan Yu, Guoxia Yu, Songli Yu, Qiuju Yu, Haisheng Yu, Jennifer Yu, Si-Yang Yu, Li-Mei Yu, Aochen Yu, Shuai Yu, Jian Yu, Yingyuan Yu, Xueting Yu, Xiaoming Yu, Caiyu Yu, Mincheng Yu, Kai Yu, Chaoping Yu, Guangchuang Yu, In-Sun Yu, Zheng-Yong Yu, Zhen-Ping Yu, Shijun Yu, Jinghua Yu, Chia-Hui Yu, Binyan Yu, Hao Yu, Xiaohong Yu, Tingdong Yu, Chang-Yin Yu, Weihui Yu, Bo Yu, Zhengtao Yu, Choo Yee Yu, Yeon Gyu Yu, Hongxiu Yu, Jingjing Yu, Chun-Xia Yu, Shi Yu, Meng Yu, Mengjia Yu, Honghong Yu, Hongjuan Yu, Hua Yu, Chenghao Yu, Jing-Jing Yu, Albert Cheung-Hoi Yu, Yuan-Bin Yu, Gang Yu, Chengjun Yu, Kunwu Yu, Weifeng Yu, Kuai Yu, Hongchi Yu, Gaihong Yu, Xiang Yu, Xu G Yu, Jianbo Yu, Ting-Ting Yu, Honghao Yu, Shun-Li Yu, Qingxiang Yu, Qiang Yu, Stephanie C Y Yu, Haikuan Yu, Yun Yu, Chia-Jung Yu, Weiping Yu, Sixun Yu, Hanpu Yu, Cai-Guo Yu, Guang-Yan Yu, Tian Yu, Xuemei Yu, Evan Yi-Wen Yu, Huijie Yu, Lina Yu, Xiaoting Yu, Xiaobo Yu, Judian Yu, Xiaoxiao Yu, Muyao Yu, Xiaohua Yu, Dong Yu, Chih-Hsiang Yu, Wei-Jie Yu, Chang Yu, Zhongping Yu, Zhengping Yu, Shibin Yu, Xuefei Yu, Xiuping Yu, Juan Yu, Mengdi Yu, Xilin Yu, Zhiyuan Yu, Zhiqiang Yu, Jiasui Yu, Chenxuan Yu, Yanjun Yu, Gechang Yu, Jack C Yu, Hanjie Yu, Jingwen Yu, Huanting Yu, Hongmei Yu, Junhui Yu, Zhenpeng Yu, Ting Yu, Qingxiong Yu, Fulong Yu, Jeryl Ritzi T Yu, Chaoji Yu, Kunpeng Yu, Lan Yu, Bixian Yu, Zongyang Yu, Eric Yu, Xi-Chong Yu, Yao Yu, Dong-Yue Yu, Hemin Yu, Bin Yu, Honghua Yu, Hongbo Yu, Tianyu Yu, Haoyun Yu, Wenqian Yu, Haizheng Yu, Dapeng Yu, Wen-Chung Yu, Liming Yu, Jennifer S Yu, Cheol-Woong Yu, Seung Jung Yu, Rongmin Yu, Xin Yu, Hyunjoo Yu, Chen Yu, Chao Yu, Zhao Yu, Huawen Yu, Wen-Kai Yu, Xinlin Yu, Zhaomei Yu, Yiping Yu, Mengdan Yu, Guo Yu, Shujun Yu, Miao Yu, Canqing Yu, You Yu, Hongsheng Yu, Yuan Yu, Jinhai Yu, Zhen Yu, Yiyi Yu, Huimin Yu, Qiyi Yu, Xiao-Chen Yu, Wenkui Yu, Yongfu Yu, Hua-Lin Yu, Chenglong Yu, Li-Sha Yu, Fu-Shin Yu, Zhenlong Yu, Ping Yu, Yongkui Yu, Juyeon Yu, Haiyang Yu, Tiantian Yu, Seung-Min Yu, Shun Yu, Yunfang Yu, Wen-Juan Yu, Baojun Yu, B Yu, Borong Yu, Jihong Yu, Long Yu, Tingting Yu, Yingjie Yu, Wei Yu, Pengfei Yu, Xiying Yu, Qianqian Yu, Shuyi Yu, Mingxi Yu, Wanyou Yu, Yanchong Yu, Liwen Yu, Guopeng Yu, Juan-han Yu, Runjie Yu, Shengqing Yu, Lingxia Yu, Xiao-Hua Yu, Caiyuan Yu, Runfa Yu, Ruyuan Yu, Fangfang Yu, Sheng-Xue Yu, LaYow Yu, Haichu Yu, Xinyue Yu, Tianrui Yu, Haoran Yu, Yi Yu, Pei-Lun Yu, Chuanqi Yu, Chia-Cheng Yu, Meiyi Yu, Haiyuan Yu, Limei Yu, Zhongwang Yu, Qian Yu, Diana Yu, Jiexin Yu, Doudou Yu, Qiaolin Yu, Juehua Yu, Hongjun Yu, You-Sheng Yu, Bingqing Yu, Yaling Yu, Bingjun Yu, Hana Yu, Bing Yu, Junqi Yu, Dehong Yu, Zhenglun Yu, Li-Qing Yu, Xuan Yu, Zhiyong Yu, Cheng-Rong Yu, Yunsheng Yu, Sophia Yu, Mengsi Yu, Jin Hai Yu, Wen-Hsuan Yu, Jishuang Yu, Weiying Yu, Yan Yu, Haibo Yu, Lin Yu, Micah Yu, Jianqiang Yu, Aijuan Yu, Jie Yu, Jiyoung Yu, Lingyun Yu, Huiyan Yu, Fa-Xing Yu, Zhuo-Min Yu, Cheng-Chan Yu, Jin-Huei Yu, Shuang-Fei Yu, Hai Tao Yu, Cheng-Chia Yu, Dongyang Yu, Peng Yu, Guoying Yu, Qinze Yu, Man Yu, Linjie Yu, Xinying Yu, Y Yu, Haojie Yu, Zhaohui Yu, Xuya Yu, Zhijian Yu, Mengyao Yu, Kaihui Yu, Susu Yu, Juanhan Yu, Jane Jie Yu, Jinling Yu, Dan-Dan Yu, Menghua Yu, Hongyao Yu, Guang-Li Yu, Danlei Yu, Yin Yu, Yang Yu, Wenwen Yu, Qinghong Yu, Shiqiang Yu, Jihyeon Yu, Dan-Qing Yu, Lei Yu, Xinlei Yu, Jinglu Yu, Yawen Yu, Fangjun Yu, Xianjun Yu, Fu-Hao Yu, Yong Yu, Ren-He Yu, Wenxia Yu, Jing Yu, Shao-wen Yu, Jiezhong Yu, Zhenhai Yu, Zhaojun Yu, Gefei Yu, Haining Yu, Ruiqi Yu, Shanhe Yu, QiFan Yu, Hui-Chieh Yu, Enqiao Yu, Huixia Yu, Xuanci Yu, Qun Yu, David S Yu, Jasmine Wai Sum Yu, Rong Yu
articles
Tao Yang, Kai Zhao, Haifeng Shu +6 more · 2017 · Neuroreport · added 2026-04-24
Neuronal regeneration and axonal regrowth mechanisms in the injured mammalian central nervous system are largely unknown. As part of a major pathway for inhibiting axonal regeneration, activated neuro Show more
Neuronal regeneration and axonal regrowth mechanisms in the injured mammalian central nervous system are largely unknown. As part of a major pathway for inhibiting axonal regeneration, activated neuronal glycosylphosphatidylinositol-anchored Nogo receptor (NgR) interacts with LINGO-1 and p75NTR to form a complex at the cell surface. However, it was found in our previous report that upregulation of NgR stimulated by injury plays a key role in neuronal regeneration in the neonatal cortex freeze-lesion model, but its downstream signalling remains elusive. In the present study, the novel regulatory role of NgR in a serine-threonine kinase WNK1 was identified. NgR's transcriptional regulation of WNK1 was identified by RT-qPCR and semiquantitative western blot after the overexpression or knockdown of NgR, and the regulation is specific to WNK1, which is not the same for its family members, WNK2, WNK3 and WNK4. Furthermore, NgR inhibition by NEP fails to affect WNK1, which indicates that WNK1 functions outside of the Nogo-A/NgR pathway. By performing a proliferation, migration and axonal extension assay, we also identified that overexpressed NgR critically regulated these processes and impairment by overexpressing NgR was rescued with coexpression of WNK1, indicating the partial role of WNK1 in NgR-mediated morphological regulation. Our study identifies a separation of functions for the NgR-regulated WNK1 in mediating proliferation, migration and axonal extension in PC12 cells as well as a specific regulatory role between NgR and WNK1 that is important for recovery from central nervous system injury. Show less
no PDF DOI: 10.1097/WNR.0000000000000800
LINGO1
Xin Wang, Nuomin Li, Nian Xiong +13 more · 2017 · Molecular neurobiology · Springer · added 2026-04-24
The cytoskeleton not only provides structure, it is an active component of cell function, and in several neurodegenerative disorders, there is evidence of cytoskeletal collapse. Cytoskeletal proteins Show more
The cytoskeleton not only provides structure, it is an active component of cell function, and in several neurodegenerative disorders, there is evidence of cytoskeletal collapse. Cytoskeletal proteins have been specifically implicated in the pathogenesis of Parkinson's disease (PD), where degeneration of dopaminergic (DA) neurons is the hallmark, but in which many factors may determine the resilience of DA neurons during aging and stress. Here we report that the human Microtubule Actin Cross-linking Factor 1 gene (MACF1), a downstream target of PD biochemical pathways, was significantly associated with PD in 713 nuclear families. A significant allelic association between PD and rs12118033, with P = 0.0098, was observed, and a P < 0.03 was observed in the association analysis by both a trend test and an allelic test. We further observed that it is the MACF1b isoform, not the MACF1a isoform, which is expressed in DA neurons from six human postmortem brains. In a Caenorhabditis elegans system, used to explore the effect of altered MACF1b on neurons, knockdown or knockout of the MACF1b orthologue vab-10 resulted in the selective loss of DA neurons, which validated MACF1's risk candidacy in PD. These findings strongly suggest that MACF1b may contribute to the genetic etiology and mechanistic causation of PD. Show less
no PDF DOI: 10.1007/s12035-016-9861-y
MACF1
Xuan Du, Can Cai, Jialing Yao +3 more · 2017 · Biochemical and biophysical research communications · Elsevier · added 2026-04-24
Non-alcoholic fatty liver disease (NAFLD) and its causal factors of hepatic insulin resistance (IR) and type 2 diabetes are rapidly growing worldwide. Developing new therapeutic methods for these cond Show more
Non-alcoholic fatty liver disease (NAFLD) and its causal factors of hepatic insulin resistance (IR) and type 2 diabetes are rapidly growing worldwide. Developing new therapeutic methods for these conditions requires a comprehensive understanding between hepatic lipid metabolism and IR. Sterol regulatory element-binding transcription factor 1c (SREBP-1c) and carbohydrate responsive-element binding protein (ChREBP) are the major regulators of fatty acid synthase (FASN), a key enzyme of de novo fatty acid synthesis. They are induced by insulin, which directly binds to the sterol regulatory elements (SRE) or carbohydrate-responsive elements (ChORE) of the FASN promoter to induce its expression. The insulin pathway involved in NAFLD has well studied, but the role of histone modification in NAFLD is just beginning to be investigated, and there is minimal data regarding its involvement. In the current study, we investigated histone modifications in FASN under insulin stimulation. H3K4 hypertrimethylation and H3, H4 hyperacetylation in the FASN promoter was found in HepG2 cells and primary hepatocytes following insulin stimulation. We also found that insulin treatment induced the transcription factor SREBP-1c, ChREBP and could accelerate FASN expression by enhancing SREBP-1c, SRE, and ChREBP ChORE binding and inducing H3, H4 hyperacetylation at SRE, ChORE, or transcription start site (TSS) regions of the FASN promoter in hepatocellular carcinoma cell line (HepG2) and primary hepatocytes. Finally, histone acetylation could influence FASN expression by impairing SREBP-1c SRE and ChREBP ChORE binding. Show less
no PDF DOI: 10.1016/j.bbrc.2016.12.129
MLXIPL
Lifen Qian, Lingman Ma, Guanzhong Wu +5 more · 2017 · Vascular pharmacology · Elsevier · added 2026-04-24
Atherosclerosis attracts increasing global attention because of its morbidity and mortality. G004, as a synthetic sulfonylurea compound, has been confirmed to have anti-hyperglycaemia, anti-platelet a Show more
Atherosclerosis attracts increasing global attention because of its morbidity and mortality. G004, as a synthetic sulfonylurea compound, has been confirmed to have anti-hyperglycaemia, anti-platelet and anti-thrombus effects. The aim of the present study was to investigate whether G004 suppress the onset and development of atherosclerosis and illuminate its probable mechanism of action. ApoE Show less
no PDF DOI: 10.1016/j.vph.2016.12.003
NR1H3
Yasin Kaymaz, Cliff I Oduor, Hongbo Yu +4 more · 2017 · Molecular cancer research : MCR · added 2026-04-24
Endemic Burkitt lymphoma (eBL) is the most common pediatric cancer in malaria-endemic equatorial Africa and nearly always contains Epstein-Barr virus (EBV), unlike sporadic Burkitt lymphoma (sBL) that Show more
Endemic Burkitt lymphoma (eBL) is the most common pediatric cancer in malaria-endemic equatorial Africa and nearly always contains Epstein-Barr virus (EBV), unlike sporadic Burkitt lymphoma (sBL) that occurs with a lower incidence in developed countries. Given these differences and the variable clinical presentation and outcomes, we sought to further understand pathogenesis by investigating transcriptomes using RNA sequencing (RNAseq) from multiple primary eBL tumors compared with sBL tumors. Within eBL tumors, minimal expression differences were found based on: anatomical presentation site, in-hospital survival rates, and EBV genome type, suggesting that eBL tumors are homogeneous without marked subtypes. The outstanding difference detected using surrogate variable analysis was the significantly decreased expression of key genes in the immunoproteasome complex ( Genomic and mutational analyses of Burkitt lymphoma tumors identify key differences based on viral content and clinical outcomes suggesting new avenues for the development of prognostic molecular biomarkers and therapeutic interventions. Show less
no PDF DOI: 10.1158/1541-7786.MCR-16-0305
PRRC2C
Jun Liang, Wei-Feng Qi, Shao Xie +6 more · 2017 · Journal of cancer research and therapeutics · added 2026-04-24
WW domain-containing protein 2 (WWP2) is an E3 ubiquitin ligase, which belongs to the NEDD4-like protein family. Recently, it is reported to play a key role in tumorigenesis and development of tumors Show more
WW domain-containing protein 2 (WWP2) is an E3 ubiquitin ligase, which belongs to the NEDD4-like protein family. Recently, it is reported to play a key role in tumorigenesis and development of tumors such as prostate and lung cancer. However, there has been not related report on glioma until now. The aim of this study is to detect the expression of WWP2 and analyze its correlation to the pathological grade and tumor recurrence in patients with glioma. Western blot and immunohistochemistry were separately used to detect the expression of WWP2 protein in 31 brain glioma tissue samples and 80 brain glioma paraffin specimens. The method of Kaplan-Meier was used to analyze the correlation between the WWP2 expression and glioma recurrence. The protein expression level of WWP2 in glioma tissue was significantly higher than that in nontumorous brain tissue (P < 0.05), and the protein expression level of WWP2 in high-grade glioma (Grade III-IV) was significantly higher than that in low-grade glioma (Grade I-II) (P < 0.05). Kaplan-Meier analysis indicated that the patients with high WWP2 expression had significantly shorter tumor recurrence time than the patients with low WWP2 expression (P < 0.05). Our study suggests that WWP2 may play a role in the genesis and development of glioma; it may be a potential biomarker to predict pathological grade and tumor recurrence in patients with glioma. Show less
no PDF DOI: 10.4103/0973-1482.176176
WWP2
Tao Tong, Ying Shen, Han-Woong Lee +2 more · 2016 · Scientific reports · Nature · added 2026-04-24
Adenylyl cyclase 3 (Adcy3), a member of the mammalian adenylyl cyclase family responsible for generating the second messenger cAMP, has long been known to play an essential role in olfactory signal tr Show more
Adenylyl cyclase 3 (Adcy3), a member of the mammalian adenylyl cyclase family responsible for generating the second messenger cAMP, has long been known to play an essential role in olfactory signal transduction. Here, we demonstrated that Adcy3 heterozygous null mice displayed increased visceral adiposity in the absence of hyperphagia and developed abnormal metabolic features characterized by impaired insulin sensitivity, dyslipidemia, and increased plasma levels of proinflammatory cytokines on both chow and high-fat diet (HFD). Of note, HFD decreased the Adcy3 expression in white adipose tissue, liver, and muscle. We also report for the first time that Adcy3 haploinsufficiency resulted in reduced expression of genes involved in thermogenesis, fatty acid oxidation, and insulin signaling, with enhanced expression of genes related to adipogenesis in peripheral tissues of mice. In conclusion, these findings suggest that cAMP signals generated by Adcy3 in peripheral tissues may play a pivotal role in modulating obesity and insulin sensitivity. Show less
📄 PDF DOI: 10.1038/srep34179
ADCY3
Xiangchun Li, William K K Wu, Rui Xing +19 more · 2016 · Cancer research · added 2026-04-24
Gastric cancer is not a single disease, and its subtype classification is still evolving. Next-generation sequencing studies have identified novel genetic drivers of gastric cancer, but their use as m Show more
Gastric cancer is not a single disease, and its subtype classification is still evolving. Next-generation sequencing studies have identified novel genetic drivers of gastric cancer, but their use as molecular classifiers or prognostic markers of disease outcome has yet to be established. In this study, we integrated somatic mutational profiles and clinicopathologic information from 544 gastric cancer patients from previous genomic studies to identify significantly mutated genes (SMG) with prognostic relevance. Gastric cancer patients were classified into regular (86.8%) and hypermutated (13.2%) subtypes based on mutation burden. Notably, TpCpW mutations occurred significantly more frequently in regular, but not hypermutated, gastric cancers, where they were associated with APOBEC expression. In the former group, six previously unreported (XIRP2, NBEA, COL14A1, CNBD1, ITGAV, and AKAP6) and 12 recurrent mutated genes exhibited high mutation prevalence (≥3.0%) and an unexpectedly higher incidence of nonsynonymous mutations. We also identified two molecular subtypes of regular-mutated gastric cancer that were associated with distinct prognostic outcomes, independently of disease staging, as confirmed in a distinct patient cohort by targeted capture sequencing. Finally, in diffuse-type gastric cancer, CDH1 mutation was found to be associated with shortened patient survival, independently of disease staging. Overall, our work identified previously unreported SMGs and a mutation signature predictive of patient survival in newly classified subtypes of gastric cancer, offering opportunities to stratify patients into optimal treatment plans based on molecular subtyping. Cancer Res; 76(7); 1724-32. ©2016 AACR. Show less
no PDF DOI: 10.1158/0008-5472.CAN-15-2443
AKAP6
Aditya Dandekar, Yining Qiu, Hyunbae Kim +10 more · 2016 · The Journal of biological chemistry · American Society for Biochemistry and Molecular Biology · added 2026-04-24
Bacterial endotoxin can induce inflammatory and metabolic changes in the host. In this study, we revealed a molecular mechanism by which a stress-inducible, liver-enriched transcription factor, cAMP-r Show more
Bacterial endotoxin can induce inflammatory and metabolic changes in the host. In this study, we revealed a molecular mechanism by which a stress-inducible, liver-enriched transcription factor, cAMP-responsive element-binding protein hepatic-specific (CREBH), modulates lipid profiles to protect the liver from injuries upon the bacterial endotoxin lipopolysaccharide (LPS). LPS challenge can activate CREBH in mouse liver tissues in a toll-like receptor (TLR)/MyD88-dependent manner. Upon LPS challenge, CREBH interacts with TNF receptor-associated factor 6 (TRAF6), an E3 ubiquitin ligase that functions as a key mediator of TLR signaling, and this interaction relies on MyD88. Further analysis demonstrated that TRAF6 mediates K63-linked ubiquitination of CREBH to facilitate CREBH cleavage and activation. CREBH directly activates expression of the gene encoding Apolipoprotein A4 (ApoA4) under LPS challenge, leading to modulation of high-density lipoprotein (HDL) in animals. CREBH deficiency led to reduced production of circulating HDL and increased liver damage upon high-dose LPS challenge. Therefore, TLR/MyD88-dependent, TRAF6-facilitated CREBH activation represents a mammalian hepatic defense response to bacterial endotoxin by modulating HDL. Show less
no PDF DOI: 10.1074/jbc.M116.755728
APOA4
Xiangfeng Lu, Jun Li, Huaixing Li +16 more · 2016 · Human molecular genetics · Oxford University Press · added 2026-04-24
Previously identified common variants explain only a small fraction of the trait heritability and at most loci the identities of the underlying causal genes and their functional variants still remain Show more
Previously identified common variants explain only a small fraction of the trait heritability and at most loci the identities of the underlying causal genes and their functional variants still remain unknown. To identify the low-frequency and rare coding variants that influence lipid levels, we conducted a meta-analysis of exome-wide association studies in 14,473 Chinese subjects, followed by a joint analysis with 1000 genomes imputed data from 6,534 samples. We replicated 24 previously reported lipid loci with exome-wide significance (P < 3.3 × 10 Show less
no PDF DOI: 10.1093/hmg/ddw261
APOA4
Yanhua Wu, Yaqin Yu, Tiancheng Zhao +10 more · 2016 · PloS one · PLOS · added 2026-04-24
The present study investigated the prevalence and risk factors for Metabolic syndrome. We evaluated the association between single nucleotide polymorphisms (SNPs) in the apolipoprotein APOA1/C3/A4/A5 Show more
The present study investigated the prevalence and risk factors for Metabolic syndrome. We evaluated the association between single nucleotide polymorphisms (SNPs) in the apolipoprotein APOA1/C3/A4/A5 gene cluster and the MetS risk and analyzed the interactions of environmental factors and APOA1/C3/A4/A5 gene cluster polymorphisms with MetS. A study on the prevalence and risk factors for MetS was conducted using data from a large cross-sectional survey representative of the population of Jilin Province situated in northeastern China. A total of 16,831 participations were randomly chosen by multistage stratified cluster sampling of residents aged from 18 to 79 years in all nine administrative areas of the province. Environmental factors associated with MetS were examined using univariate and multivariate logistic regression analyses based on the weighted sample data. A sub-sample of 1813 survey subjects who met the criteria for MetS patients and 2037 controls from this case-control study were used to evaluate the association between SNPs and MetS risk. Genomic DNA was extracted from peripheral blood lymphocytes, and SNP genotyping was determined by MALDI-TOF-MS. The associations between SNPs and MetS were examined using a case-control study design. The interactions of environmental factors and APOA1/C3/A4/A5 gene cluster polymorphisms with MetS were assessed using multivariate logistic regression analysis. The overall adjusted prevalence of MetS was 32.86% in Jilin province. The prevalence of MetS in men was 36.64%, which was significantly higher than the prevalence in women (29.66%). MetS was more common in urban areas (33.86%) than in rural areas (31.80%). The prevalence of MetS significantly increased with age (OR = 8.621, 95%CI = 6.594-11.272). Mental labor (OR = 1.098, 95%CI = 1.008-1.195), current smoking (OR = 1.259, 95%CI = 1.108-1.429), excess salt intake (OR = 1.252, 95%CI = 1.149-1.363), and a fruit and dairy intake less than 2 servings a week were positively associated with MetS (P<0.05). A family history of diabetes (OR = 1.630, 95%CI = 1.484-1.791), cardiovascular disease or cerebral diseases (OR = 1.297, 95%CI = 1.211-1.389) was associated with MetS. APOA1 rs670, APOA5 rs662799 and rs651821 revealed significant differences in genotype distributions between the MetS patients and control subjects. The minor alleles of APOA1 rs670, APOA5 rs662799 and rs651821, and APOA5 rs2075291 were associated with MetS (P<0.0016). APOA1 rs5072 and APOC3 rs5128, APOA5 rs651821 and rs662799 were in strong linkage disequilibrium to each other with r2 greater than 0.8. Five haplotypes were associated with an increased risk of MetS (OR = 1.23, 1.58, 1.80, 1.90, and 1.98). When we investigated the interactions of environmental factors and APOA1/C3/A4/A5 gene cluster gene polymorphisms, we found that APOA5 rs662799 had interactions with tobacco use and alcohol consumption (PGE<0.05). There was a high prevalence of MetS in the northeast of China. Male gender, increasing age, mental labor, family history of diabetes, cardiovascular disease or cerebral diseases, current smoking, excess salt intake, fruit and dairy intake less than 2 servings a week, and drinking were associated with MetS. The APOA1/C3/A4/A5 gene cluster was associated with MetS in the Han Chinese. APOA5 rs662799 had interactions with the environmental factors associated with MetS. Show less
📄 PDF DOI: 10.1371/journal.pone.0147946
APOA4
Chunling Yan, Yanlin He, Yuanzhong Xu +12 more · 2016 · Neuroendocrinology · added 2026-04-24
Apolipoprotein A-IV (apoA-IV) in the brain potently suppresses food intake. However, the mechanisms underlying its anorexigenic effects remain to be identified. We first examined the effects of apoA-I Show more
Apolipoprotein A-IV (apoA-IV) in the brain potently suppresses food intake. However, the mechanisms underlying its anorexigenic effects remain to be identified. We first examined the effects of apoA-IV on cellular activities in hypothalamic neurons that co-express agouti-related peptide (AgRP) and neuropeptide Y (NPY) and in neurons that express pro-opiomelanocortin (POMC). We then compared anorexigenic effects of apoA-IV in wild-type mice and in mutant mice lacking melanocortin 4 receptors (MC4Rs; the receptors of AgRP and the POMC gene product). Finally, we examined expression of apoA-IV in mouse hypothalamus and quantified its protein levels at fed versus fasted states. We demonstrate that apoA-IV inhibited the firing rate of AgRP/NPY neurons. The decreased firing was associated with hyperpolarized membrane potential and decreased miniature excitatory postsynaptic current. We further used c-fos immunoreactivity to show that intracerebroventricular (i.c.v.) injections of apoA-IV abolished the fasting-induced activation of AgRP/NPY neurons in mice. Further, we found that apoA-IV depolarized POMC neurons and increased their firing rate. In addition, genetic deletion of MC4Rs blocked anorexigenic effects of i.c.v. apoA-IV. Finally, we detected endogenous apoA-IV in multiple neural populations in the mouse hypothalamus, including AgRP/NPY neurons, and food deprivation suppressed hypothalamic apoA-IV protein levels. Our findings support a model where central apoA-IV inhibits AgRP/NPY neurons and activates POMC neurons to activate MC4Rs, which in turn suppresses food intake. Show less
📄 PDF DOI: 10.1159/000439436
APOA4
Yun Tao, Yisong Xiong, Huimin Wang +6 more · 2016 · Lipids in health and disease · BioMed Central · added 2026-04-24
The fatality rate for cardiovascular disease (CVD) has increased in recent years and higher levels of triglyceride have been shown to be an independent risk factor for atherosclerotic CVD. Dysfunction Show more
The fatality rate for cardiovascular disease (CVD) has increased in recent years and higher levels of triglyceride have been shown to be an independent risk factor for atherosclerotic CVD. Dysfunction of endothelial cells (ECs) is also a key factor of CVD. APOC3 is an important molecule in lipid metabolism that is closely associated with hyperlipidemia and an increased risk of developing CVD. But the direct effects of APOC3 on ECs were still unknown. This study was aimed at determining the effects of APOC3 on inflammation, chemotaxis and exudation in ECs. ELISA, qRT-PCR, immunofluorescence, flow cytometry and transwell assays were used to investigate the effects of APOC3 on human umbilical vein endothelial cells (HUVECs). SiRNA-induced TNF-α and JAM-1 silencing were used to observe how APOC3 influenced the inflammatory process in the ECs. Our results showed that APOC3 was closely associated with the inflammatory process in ECs, and that this process was characterized by the increased expression of TNF-α. Inflammatory processes further disrupted the tight junctions (TJs) between HUVECs by causing increased expression of JAM-1. JAM-1 was involved in maintaining the integrity of TJs, and it promoted the assembly of platelets and the exudation of leukocytes. Changes in its expression promoted chemotaxis and the exudation of ECs, which contributed to atherosclerosis. While the integrity of the TJs was disrupted, the adhesion of THP-1 cells to HUVECs was also increased by APOC3. In this study, we describe the mechanism by which APOC3 causes inflammation, chemotaxis and the exudation of ECs, and we suggest that controlling the inflammatory reactions that are caused by APOC3 may be a new method to treat CVD. Show less
📄 PDF DOI: 10.1186/s12944-016-0326-0
APOC3
Weijie Wu, Qingqing Liu, Yuxi Liu +2 more · 2016 · Biochemical and biophysical research communications · Elsevier · added 2026-04-24
Dixdc1 (DIX domain containing-1), the mammalian homolog of Ccd1 (Coiled-coil-Dishevelled-Axin1), is a protein containing a coiled-coil domain and a Dishevelled-Axin (DIX) domain. As a novel component Show more
Dixdc1 (DIX domain containing-1), the mammalian homolog of Ccd1 (Coiled-coil-Dishevelled-Axin1), is a protein containing a coiled-coil domain and a Dishevelled-Axin (DIX) domain. As a novel component of the Wnt pathway, Dixdc1 has been reported to be able to promote neural progenitor proliferation and neuronal differentiation via Wnt/β-catenin signaling. But there still remains something unknown about Dixdc1 distribution and functions in the lesion and regeneration of the peripheral nervous system (PNS), so we tried to investigate dynamic changes of Dixdc1 expression in a rat sciatic nerve crush (SNC) model in this study. First of all, we detected SNC-induced increased levels of Dixdc1 in Schwann cells and interestingly identified parallel expression of PCNA (proliferation cell nuclear antigen) with Dixdc1. Besides, we observed up-regulated Dixdc1 during the process of TNF-α-induced Schwann cell proliferation. Also, we discovered that Dixdc1 could promote G1-S phase transition accompanied with the up-regulation of CyclinD1 and down-regulation of p21. More importantly, enhanced effects of Dixdc1 on cell proliferation were confirmed to be associated with PI3K activation. Not only blocking of the PI3K but Dixdc1 knockdown led to significantly decreased ability for proliferation, as well as down-regulation of CyclinD1 and up-regulation of p21. In summary, these data demonstrated that Dixdc1 might participate in Schwann cell proliferation by targeting CyclinD1 and p21 at least partially through the PI3K/AKT activation. Show less
no PDF DOI: 10.1016/j.bbrc.2016.08.058
AXIN1
Tong-Hong Wang, Cheng-Chia Yu, Yong-Shiang Lin +6 more · 2016 · Oncotarget · Impact Journals · added 2026-04-24
Recently, increasing numbers of long noncoding RNAs (lncRNAs), with both oncogenic and tumor-suppressive potential, have been found to be aberrantly expressed in various human cancers. However, the fu Show more
Recently, increasing numbers of long noncoding RNAs (lncRNAs), with both oncogenic and tumor-suppressive potential, have been found to be aberrantly expressed in various human cancers. However, the function of lncRNAs in hepatocellular carcinoma (HCC) progression remains largely unknown. In this study, we performed a comprehensive microarray analysis of lncRNA expression using human HCC specimens. After validation in 119 human HCC tissues, we identified a novel tumor suppressor lncRNA, CPS1 intronic transcript 1 (CPS1-IT1). To elucidate the clinical significance of CPS1-IT1 in HCC, correlations between CPS1-IT1 levels, clinical parameters, and survival outcomes were analyzed. In vitro and in vivo functional assays were also performed to dissect the potential underlying mechanisms. Expression of CPS1-IT1 was significantly decreased in 73% of HCC tissues, and patients with low CPS1-IT1 expression had poor survival outcomes. Furthermore, in vitro functional assays indicated that CPS1-IT1 significantly reduced cell proliferation, migration and invasion capacities through reduced Hsp90 binding to and activation of HIF-1α, thereby suppressing the epithelial-mesenchymal transition (EMT). An in vivo animal model also demonstrated the tumor suppressor role of CPS1- IT1 via decreased tumor growth and metastasis. In conclusion, lncRNA CPS1-IT1 acts as a tumor suppressor in HCC by reducing HIF-1α activation and suppressing EMT. The findings of this study establish a function for CPS1-IT1 in HCC progression and suggest its potential as a new prognostic biomarker and target for HCC therapy. Show less
📄 PDF DOI: 10.18632/oncotarget.9635
CPS1
Kam Tong Leung, Kathy Yuen Yee Chan, Terence Ping Yuen Ma +9 more · 2016 · The Journal of nutritional biochemistry · Elsevier · added 2026-04-24
The small intestine is the exclusive site of arginine synthesis in neonates. Low levels of circulating arginine have been associated with the occurrence of necrotizing enterocolitis (NEC) but the mech Show more
The small intestine is the exclusive site of arginine synthesis in neonates. Low levels of circulating arginine have been associated with the occurrence of necrotizing enterocolitis (NEC) but the mechanism of arginine dysregulation has not been fully elucidated. We aimed to investigate (i) expressional changes of arginine synthesizing and catabolic enzymes in human intestinal tissues of NEC, spontaneous intestinal perforation (SIP) and noninflammatory surgical conditions (Surg-CTL) and to investigate the (ii) mechanisms of arginine dysregulation and enterocyte proliferation upon stimulation by bacterial components, arginine depletion, ARG1 overexpression and nitric oxide (NO) supplementation. Our results showed that expressions of arginine synthesizing enzymes ALDH18A1, ASL, ASS1, CPS1, GLS, OAT and PRODH were significantly decreased in NEC compared with Surg-CTL or SIP tissues. Catabolic enzyme ARG1 was increased (>100-fold) in NEC tissues and histologically demonstrated to be expressed by infiltrating neutrophils. No change in arginine metabolic enzymes was observed between SIP and Surg-CTL tissues. In CaCO2 cells, arginine metabolic enzymes were differentially dysregulated by lipopolysaccharide or lipoteichoic acid. Depletion of arginine reduced cell proliferation and this phenomenon could be partially rescued by NO. Overexpression of ARG1 also reduced enterocyte proliferation. We provided the first expressional profile of arginine metabolic enzymes at the tissue level of NEC. Our findings suggested that arginine homeostasis was severely disturbed and could be triggered by inflammatory responses of enterocytes and infiltrating neutrophils as well as bacterial components. Such reactions could reduce arginine and NO, resulting in mucosal damage. The benefit of arginine supplementation for NEC prophylaxis merits further clinical evaluation. Show less
no PDF DOI: 10.1016/j.jnutbio.2015.10.010
CPS1
Tian-Lu Wang, Ying-Qiu Song, Yang-Wu Ren +6 more · 2016 · Clinical laboratory · added 2026-04-24
Dual-specificity phosphatase 6 (DUSP6) inactivates different target kinases to regulate cell proliferation and differentiation. Altered DUSP6 expressions or gene polymorphisms are associated with huma Show more
Dual-specificity phosphatase 6 (DUSP6) inactivates different target kinases to regulate cell proliferation and differentiation. Altered DUSP6 expressions or gene polymorphisms are associated with human cancer development including non-small cell lung cancer (NSCLC). DNA topoisomerase II alpha (TOP2A) regulates chromosome condensation and chromatid separation, and altered TOP2A expressions are associated with drug resistance development. This study assessed DUSP6 and TOP2A single nucleotide polymorphisms (SNPs) associated with NSCLC patient survival. This study included 152 surgically resected NSCLC patients and 277 chemoradiotherapy treated inoperable cases. DNA samples from each patient were genotyped for DUSP6 and TOP2A SNPs. Kaplan-Meier survival analysis, log-rank test, and Cox proportional hazard model were used to evaluate the association between these variants and NSCLC overall survival. DUSP6 rs2279574 A/A genotype was associated with significantly poor inoperable NSCLC patient overall survival (A/A vs. C/C, adjusted HR = 1.549, 95% CI = 1.019-2.355). Stratification analysis against clinical stage, histology, weight loss, and ECOG performance status revealed that the DUSP6 rs2279574 A/A variant homozygous genotype is associated with a decrease in survival of stage IV NSCLC patients compared to those with the C/C genotype (log-rank, p = 0.003). No association was found among histology, weight loss, and ECOG performance status. Moreover, there was no association of TOP2A SNPs between clinicopathological and survival data. Data obtained from the current study demonstrated that functional DUSP6 rs2279574 polymorphism was able to predict inoperable NSCLC patient survival after chemoradiotherapy. Show less
no PDF DOI: 10.7754/clin.lab.2015.150432
DUSP6
Wenxiu Ning, Yanan Yu, Honglin Xu +5 more · 2016 · Developmental cell · Elsevier · added 2026-04-24
For adaptation to complex cellular functions, dynamic cytoskeletal networks are required. There are two major components of the cytoskeleton, microtubules and actin filaments, which form an intricate Show more
For adaptation to complex cellular functions, dynamic cytoskeletal networks are required. There are two major components of the cytoskeleton, microtubules and actin filaments, which form an intricate network maintaining an exquisite cooperation to build the physical basis for their cellular function. However, little is known about the molecular mechanism underlying their synergism. Here, we show that in Caco2 epithelial cells, noncentrosomal microtubules crosstalk with F-actin through their minus ends and contribute to the regulation of focal adhesion size and cell migration. We demonstrate that ACF7, a member of the spectraplakin family of cytoskeletal crosslinking proteins, interacts with Nezha (also called CAMSAP3) at the minus ends of noncentrosomal microtubules and anchors them to actin filaments. Those noncentrosomal microtubules cooperate with actin filaments through retrograde flow to keep their length and orientation perpendicular to the cell edge as well as regulate focal adhesion size and cell migration. Show less
no PDF DOI: 10.1016/j.devcel.2016.09.003
MACF1
Hongxiang Zeng, Hao Gu, Chiqi Chen +9 more · 2016 · Oncotarget · Impact Journals · added 2026-04-24
Targeting leukemia-initiating cells (LICs) is the key to eradicating leukemia and preventing its relapse. Recent studies have indicated that metabolic regulation may play a critical role in the mainte Show more
Targeting leukemia-initiating cells (LICs) is the key to eradicating leukemia and preventing its relapse. Recent studies have indicated that metabolic regulation may play a critical role in the maintenance of stemness in LICs, although the detailed mechanisms are poorly understood. Herein, we provide intriguing evidence showing that a glucose-responsive transcription factor, carbohydrate responsive element binding protein (ChREBP), served as a tumor suppressor rather than an oncogene, as previously described, to inhibit the development of acute myeloid leukemia by promoting the differentiation of LICs. Using an MLL-AF9-induced murine leukemia model, we demonstrated that the deletion of ChREBP resulted in the blockage of the differentiation of LICs and significantly reduced survival in ChREBP-null leukemic mice. However, ChREBP was not required for the normal repopulation abilities of hematopoietic stem cells. ChREBP promoted leukemia cell differentiation through the direct inhibition of RUNX1 or the transactivation of TXNIP to downregulate the RUNX1 level and ROS generation. Moreover, knockdown of ChREBP in human leukemia THP1 cells led to markedly enhanced proliferation and decreased differentiation upon PMA treatment. Collectively, we unraveled an unexpected role of ChREBP in leukemogenesis, which may provide valuable clues for developing novel metabolic strategies for leukemia treatment. Show less
📄 PDF DOI: 10.18632/oncotarget.9520
MLXIPL
Jing Lin, Yanwen Cheng, Tao Wang +4 more · 2016 · International immunopharmacology · Elsevier · added 2026-04-24
Soyasaponin Ab (SA) has been reported to have anti-inflammatory effect. However, the effects of SA on lipopolysaccharide (LPS)-induced acute lung injury (ALI) have not been reported. The aim of this s Show more
Soyasaponin Ab (SA) has been reported to have anti-inflammatory effect. However, the effects of SA on lipopolysaccharide (LPS)-induced acute lung injury (ALI) have not been reported. The aim of this study was to investigate the anti-inflammatory effects of SA on LPS-induced ALI and clarify the possible mechanism. The mice were stimulated with LPS to induce ALI. SA was given 1h after LPS treatment. 12h later, lung tissues were collected to assess pathological changes and edema. Bronchoalveolar lavage fluid (BALF) was collected to assess inflammatory cytokines and nitric oxide (NO) production. In vitro, mice alveolar macrophages were used to investigate the anti-inflammatory mechanism of SA. Our results showed that SA attenuated LPS-induced lung pathological changes, edema, the expression of cycloxygenase-2 (COX-2) and inducible nitric oxide synthase (iNOS) in lung tissues, as well as TNF-α, IL-6, IL-1β, and NO production in mice. Meanwhile, SA up-regulated the activities of superoxide dismutase (SOD) and catalase decreased by LPS in mice. SA also inhibited LPS-induced TNF-α, IL-6 and IL-1β production as well as NF-κB activation in alveolar macrophages. Furthermore, SA could activate Liver X Receptor Alpha (LXRα) and knockdown of LXRα by RNAi abrogated the anti-inflammatory effects of SA. In conclusion, the current study demonstrated that SA exhibited protective effects against LPS-induced acute lung injury and the possible mechanism was involved in activating LXRα, thereby inhibiting LPS-induced inflammatory response. Show less
no PDF DOI: 10.1016/j.intimp.2015.12.001
NR1H3
Chen-Xu Ge, Rong Yu, Min-Xuan Xu +4 more · 2016 · European journal of pharmacology · Elsevier · added 2026-04-24
Betaine has been proven effective in treating nonalcoholic fatty liver disease (NAFLD) in animal models, however, its molecular mechanisms remain elusive. The aims of this study were to explore the me Show more
Betaine has been proven effective in treating nonalcoholic fatty liver disease (NAFLD) in animal models, however, its molecular mechanisms remain elusive. The aims of this study were to explore the mechanisms mediating the anti-inflammatory and anti-lipogenic actions of betaine in fructose-fed rats. In this study, betaine improved insulin resistance, reduced body weight gain and serum lipid levels, and prevented hepatic lipid accumulation in fructose-fed rats. It up-regulated hepatic expression of liver X receptor-alpha (LXRα) and peroxisome proliferator-activated receptor-alpha (PPARα), with the attenuation of the changes of their target genes, including hepatic carnitine palmitoyl transferase (CPT) 1α, glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1, apolipoprotein B, sterol regulatory element-binding protein 1c and adipocyte differentiation-related protein, involved in fatty acid oxidation and lipid storage in these model rats. Furthermore, betaine alleviated ER stress and inhibited acetyl-CoA carboxylase α, CPT II, stearoyl-CoA desaturase 1 and fatty acid synthase expression involved in fatty acid synthesis in the liver of fructose-fed rats. Betaine suppressed hepatic gluconeogenesis in fructose-fed rats by moderating protein kinase B -forkhead box protein O1 pathway, as well as p38 mitogen-activated protein kinase and mammalian target of rapamycin activity. Moreover, betaine inhibited hepatic nuclear factor kappa B /nucleotide-binding domain, leucine-rich-containing family, pyrin domain-containing-3 inflammasome activation-mediated inflammation in this animal model. These results demonstrated that betaine ameliorated hepatic lipid accumulation, gluconeogenesis, and inflammation through restoring LXRα and PPARα expression and alleviating ER stress in fructose-fed rats. This study provides the potential mechanisms of betaine involved in the treatment of NAFLD. Show less
no PDF DOI: 10.1016/j.ejphar.2015.11.043
NR1H3
Chiung-Hung Hsu, Chia-Wei Hsu, Chuen Hsueh +7 more · 2016 · Molecular & cellular proteomics : MCP · American Society for Biochemistry and Molecular Biology · added 2026-04-24
Lung cancer is the leading cause of cancer-related death worldwide. Both diagnostic and prognostic biomarkers are urgently needed to increase patient survival. In this study, we identified/quantified Show more
Lung cancer is the leading cause of cancer-related death worldwide. Both diagnostic and prognostic biomarkers are urgently needed to increase patient survival. In this study, we identified/quantified 1763 proteins from paired adenocarcinoma (ADC) tissues with different extents of lymph node (LN) involvement using an iTRAQ-based quantitative proteomic analysis. Based on a bioinformatics analysis and literature search, we selected six candidates (ERO1L, PABPC4, RCC1, RPS25, NARS, and TARS) from a set of 133 proteins that presented a 1.5-fold increase in expression in ADC tumors without LN metastasis compared with adjacent normal tissues. These six proteins were further verified using immunohistochemical staining and Western blot analyses. The protein levels of these six candidates were higher in tumor tissues compared with adjacent normal tissues. The ERO1L and NARS levels were positively associated with LN metastasis. Importantly, ERO1L overexpression in patients with early-stage ADC was positively correlated with poor survival, suggesting that ERO1L overexpression in primary sites of early-stage cancer tissues indicates a high risk for cancer micrometastasis. Moreover, we found that knockdown of either ERO1L or NARS reduced the viability and migration ability of ADC cells. Our results collectively provide a potential biomarker data set for ADC diagnosis/prognosis and reveal novel roles of ERO1L and NARS in ADC progression. Show less
no PDF DOI: 10.1074/mcp.M115.057026
PABPC4
Zong-Bo Wei, Ye-Feng Yuan, Florence Jaouen +8 more · 2016 · Autophagy · Taylor & Francis · added 2026-04-24
Searching for new regulators of autophagy involved in selective dopaminergic (DA) neuron loss is a hallmark in the pathogenesis of Parkinson disease (PD). We here report that an endoplasmic reticulum Show more
Searching for new regulators of autophagy involved in selective dopaminergic (DA) neuron loss is a hallmark in the pathogenesis of Parkinson disease (PD). We here report that an endoplasmic reticulum (ER)-associated transmembrane protein SLC35D3 is selectively expressed in subsets of midbrain DA neurons in about 10% TH (tyrosine hydroxylase)-positive neurons in the substantia nigra pars compacta (SNc) and in about 22% TH-positive neurons in the ventral tegmental area (VTA). Loss of SLC35D3 in ros (roswell mutant) mice showed a reduction of 11.9% DA neurons in the SNc and 15.5% DA neuron loss in the VTA with impaired autophagy. We determined that SLC35D3 enhanced the formation of the BECN1-ATG14-PIK3C3 complex to induce autophagy. These results suggest that SLC35D3 is a new regulator of tissue-specific autophagy and plays an important role in the increased autophagic activity required for the survival of subsets of DA neurons. Show less
no PDF DOI: 10.1080/15548627.2016.1179402
PIK3C3
Jing Yu, Yongmin Lai, Xi Wu +2 more · 2016 · Biochemical and biophysical research communications · Elsevier · added 2026-04-24
Drought is the greatest threat for crops, including rice. In an effort to identify rice genes responsible for drought tolerance, a drought-responsive gene OsEm1 encoding a group I LEA protein, was cho Show more
Drought is the greatest threat for crops, including rice. In an effort to identify rice genes responsible for drought tolerance, a drought-responsive gene OsEm1 encoding a group I LEA protein, was chosen for this study. OsEm1 was shown at vegetative stages to be responsive to various abiotic stresses, including drought, salt, cold and the hormone ABA. In this study, we generated OsEm1-overexpressing rice plants to explore the function of OsEm1 under drought conditions. Overexpression of OsEm1 increases ABA sensitivity and enhances osmotic tolerance in rice. Compared with wild type, the OsEm1-overexpressing rice plants showed enhanced plant survival ratio at the vegetative stage; moreover, over expression of OsEm1 in rice increased the expression of other LEA genes, including RAB16A, RAB16C, RAB21, and LEA3, likely protecting organ integrity against harsh environments. Interestingly, the elevated level of OsEm1 had no different phenotype compared with wild type under normal condition. Our findings suggest that OsEm1 is a positive regulator of drought tolerance and is potentially promising for engineering drought tolerance in rice. Show less
no PDF DOI: 10.1016/j.bbrc.2016.08.010
RAB21
Ri-Yao Yang, Huiting Xue, Lan Yu +3 more · 2016 · PloS one · PLOS · added 2026-04-24
Galectin-12, a member of the galectin family of β-galactoside-binding animal lectins, is preferentially expressed in adipocytes and required for adipocyte differentiation in vitro. This protein was re Show more
Galectin-12, a member of the galectin family of β-galactoside-binding animal lectins, is preferentially expressed in adipocytes and required for adipocyte differentiation in vitro. This protein was recently found to regulate lipolysis, whole body adiposity, and glucose homeostasis in vivo. Here we identify VPS13C, a member of the VPS13 family of vacuolar protein sorting-associated proteins highly conserved throughout eukaryotic evolution, as a major galectin-12-binding protein. VPS13C is upregulated during adipocyte differentiation, and is required for galectin-12 protein stability. Knockdown of Vps13c markedly reduces the steady-state levels of galectin-12 by promoting its degradation through primarily the lysosomal pathway, and impairs adipocyte differentiation. Our studies also suggest that VPS13C may have a broader role in protein quality control. The regulation of galectin-12 stability by VPS13C could potentially be exploited for therapeutic intervention of obesity and related metabolic diseases. Show less
no PDF DOI: 10.1371/journal.pone.0153534
VPS13C
Ling Wang, Lan Cheng, Nan-Nan Li +3 more · 2016 · American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · Wiley · added 2026-04-24
Large-scale meta-analysis of genome-wide association data has identified six new risk loci (SIPA1L2, INPP5F, MIR4697, GCH1, VPS13C, and DDRGK1) for Parkinson's disease (PD). However, the characteristi Show more
Large-scale meta-analysis of genome-wide association data has identified six new risk loci (SIPA1L2, INPP5F, MIR4697, GCH1, VPS13C, and DDRGK1) for Parkinson's disease (PD). However, the characteristics of those loci in a Han Chinese population from mainland China are unknown. We examined genetic associations of VPS13C rs2414739, MIR4697 rs329648, GCH1 rs11158026, and SIPA1L2 rs10797576 with PD susceptibility in a Han Chinese population of 1028 sporadic PD patients and 1109 healthy controls. All subjects were genotyped for these loci using the Sequenom iPLEX Assay. We also conducted further stratified analysis according to age at onset and compared the clinical characteristics between minor allele carriers and non-carriers for each locus. However, we did not observe any significant difference in genotype distribution between PD patients and controls for the four loci, even after being stratified by age at onset. Besides, minor allele carriers cannot be distinguished from non-carriers based on their clinical features. Our findings first demonstrated that VPS13C rs2414739, MIR4697 rs329648, GCH1 rs11158026, and SIPA1L2 rs10797576 do not confer a significant risk for PD in Chinese population. Additional replication studies in other populations and functional studies are warranted to better validate the role of the four new loci in PD risk. Show less
no PDF DOI: 10.1002/ajmg.b.32410
VPS13C
Zhenlong Yu, Tao Li, Chao Wang +7 more · 2016 · Oncotarget · Impact Journals · added 2026-04-24
Deciding appropriate therapy for multiple myeloma (MM) is challenging because of the occurrence of multiple chromosomal changes and the fatal nature of the disease. In the current study, gamabufotalin Show more
Deciding appropriate therapy for multiple myeloma (MM) is challenging because of the occurrence of multiple chromosomal changes and the fatal nature of the disease. In the current study, gamabufotalin (GBT) was isolated from toad venom, and its tumor-specific cytotoxicity was investigated in human MM cells. We found GBT inhibited cell growth and induced apoptosis with the IC50 values <50 nM. Mechanistic studies using functional approaches identified GBT as an inhibitor of c-Myc. Further analysis showed that GBT especially evoked the ubiquitination and degradation of c-Myc protein, thereby globally repressing the expression of c-Myc target genes. GBT treatment inhibited ERK and AKT signals, while stimulating the activation of JNK cascade. An E3 ubiquitin-protein ligase, WWP2, was upregulated following JNK activation and played an important role in c-Myc ubiquitination and degradation through direct protein-protein interaction. The antitumor effect of GBT was validated in a xenograft mouse model and the suppression of MM-induced osteolysis was verified in a SCID-hu model in vivo. Taken together, our study identified the potential of GBT as a promising therapeutic agent in the treatment of MM. Show less
no PDF DOI: 10.18632/oncotarget.7398
WWP2
G Davies, N Armstrong, J C Bis +126 more · 2015 · Molecular psychiatry · Nature · added 2026-04-24
G Davies, N Armstrong, J C Bis, J Bressler, V Chouraki, S Giddaluru, E Hofer, C A Ibrahim-Verbaas, M Kirin, J Lahti, S J van der Lee, S Le Hellard, T Liu, R E Marioni, C Oldmeadow, I Postmus, A V Smith, J A Smith, A Thalamuthu, R Thomson, V Vitart, J Wang, L Yu, L Zgaga, W Zhao, R Boxall, S E Harris, W D Hill, D C Liewald, M Luciano, H Adams, D Ames, N Amin, P Amouyel, A A Assareh, R Au, J T Becker, A Beiser, C Berr, L Bertram, E Boerwinkle, B M Buckley, H Campbell, J Corley, P L De Jager, C Dufouil, J G Eriksson, T Espeseth, J D Faul, I Ford, Generation Scotland, R F Gottesman, M E Griswold, V Gudnason, T B Harris, G Heiss, A Hofman, E G Holliday, J Huffman, S L R Kardia, N Kochan, D S Knopman, J B Kwok, J-C Lambert, T Lee, G Li, S-C Li, M Loitfelder, O L Lopez, A J Lundervold, A Lundqvist, K A Mather, S S Mirza, L Nyberg, B A Oostra, A Palotie, G Papenberg, A Pattie, K Petrovic, O Polasek, B M Psaty, P Redmond, S Reppermund, J I Rotter, H Schmidt, M Schuur, P W Schofield, R J Scott, V M Steen, D J Stott, J C van Swieten, K D Taylor, J Trollor, S Trompet, A G Uitterlinden, G Weinstein, E Widen, B G Windham, J W Jukema, A F Wright, M J Wright, Q Yang, H Amieva, J R Attia, D A Bennett, H Brodaty, A J M de Craen, C Hayward, M A Ikram, U Lindenberger, L-G Nilsson, D J Porteous, K Räikkönen, I Reinvang, I Rudan, P S Sachdev, R Schmidt, P R Schofield, V Srikanth, J M Starr, S T Turner, D R Weir, J F Wilson, C van Duijn, L Launer, A L Fitzpatrick, S Seshadri, T H Mosley, I J Deary Show less
General cognitive function is substantially heritable across the human life course from adolescence to old age. We investigated the genetic contribution to variation in this important, health- and wel Show more
General cognitive function is substantially heritable across the human life course from adolescence to old age. We investigated the genetic contribution to variation in this important, health- and well-being-related trait in middle-aged and older adults. We conducted a meta-analysis of genome-wide association studies of 31 cohorts (N=53,949) in which the participants had undertaken multiple, diverse cognitive tests. A general cognitive function phenotype was tested for, and created in each cohort by principal component analysis. We report 13 genome-wide significant single-nucleotide polymorphism (SNP) associations in three genomic regions, 6q16.1, 14q12 and 19q13.32 (best SNP and closest gene, respectively: rs10457441, P=3.93 × 10(-9), MIR2113; rs17522122, P=2.55 × 10(-8), AKAP6; rs10119, P=5.67 × 10(-9), APOE/TOMM40). We report one gene-based significant association with the HMGN1 gene located on chromosome 21 (P=1 × 10(-6)). These genes have previously been associated with neuropsychiatric phenotypes. Meta-analysis results are consistent with a polygenic model of inheritance. To estimate SNP-based heritability, the genome-wide complex trait analysis procedure was applied to two large cohorts, the Atherosclerosis Risk in Communities Study (N=6617) and the Health and Retirement Study (N=5976). The proportion of phenotypic variation accounted for by all genotyped common SNPs was 29% (s.e.=5%) and 28% (s.e.=7%), respectively. Using polygenic prediction analysis, ~1.2% of the variance in general cognitive function was predicted in the Generation Scotland cohort (N=5487; P=1.5 × 10(-17)). In hypothesis-driven tests, there was significant association between general cognitive function and four genes previously associated with Alzheimer's disease: TOMM40, APOE, ABCG1 and MEF2C. Show less
📄 PDF DOI: 10.1038/mp.2014.188
AKAP6
Chen-Lu Wu, Shui-ping ZHAO, Bi-Lian Yu · 2015 · Biological reviews of the Cambridge Philosophical Society · Blackwell Publishing · added 2026-04-24
Exchangeable apolipoproteins play an important role in systemic lipid metabolism, especially for lipoproteins with which they are associated. Recently, emerging evidence has suggested that exchangeabl Show more
Exchangeable apolipoproteins play an important role in systemic lipid metabolism, especially for lipoproteins with which they are associated. Recently, emerging evidence has suggested that exchangeable apolipoproteins, such as apolipoprotein A4 (apoA4), apolipoprotein A5 (apoA5), apolipoprotein C3 (apoC3) and apolipoprotein E (apoE), also exert important effects on intracellular lipid homeostasis. There is a close link between lipid metabolism in adipose tissue and liver because the latter behaves as the metabolic sensor of dysfunctional adipose tissue and is a main target of lipotoxicity. Given that the energy balance between these two major lipogenic organs is intimately involved in the pathogenesis of obesity and non-alcoholic fatty liver disease (NAFLD), we here review recent findings concerning the intracellular function of exchangeable apolipoproteins in triglyceride metabolism in adipocytes and hepatocytes. These apolipoproteins may act as mediators of crosstalk between adipose tissue and liver, thus influencing development of obesity and hepatosteatosis. This review provides new insights into the physiological role of exchangeable apolipoproteins and identifies latent targets for therapeutic intervention of obesity and its related disorders. Show less
no PDF DOI: 10.1111/brv.12116
APOA4
Guang Yang, Ming-Ming Lei, Chun-Lei Yu +3 more · 2015 · Lipids in health and disease · BioMed Central · added 2026-04-24
Triglycerides (TGs) are proatherogenic lipoproteins involving the risk of coronary heart disease (CHD), while apolipoprotein A5 (APOA5) and apolipoprotein C3 (APOC3) are main lipoproteins composing TG Show more
Triglycerides (TGs) are proatherogenic lipoproteins involving the risk of coronary heart disease (CHD), while apolipoprotein A5 (APOA5) and apolipoprotein C3 (APOC3) are main lipoproteins composing TG-rich lipoproteins. In this study, we aim to explore the correlation of CHD with APOA5 -1131 T > C and APOC3 -455 T > C single nucleotide polymorphisms (SNPs). A sum of 210 CHD patients, hospitalized between Jan. 2013 and Mar. 2015 at China-Japan Union Hospital, Jilin University, were selected as our case group and 223 healthy individuals who had physical examination at same hospital at the same period were selected as control group. The frequency distribution of genotypes of APOA5 -1131 T > C and APOC3 -455 T > C SNPs were measured by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP). The Stata 12.0 software was utilized for statistical analyses. There was no significant difference on age and sex between case and control group (P > 0.05). History of smoking, drinking, hypertension and diabetes mellitus, body mass index and levels of TG and fasting blood sugar in case group were shown to be higher than control group (P < 0.05), while levels of total cholesterol, high-density lipoprotein cholesterol and low-density lipoprotein cholesterol in case group were lower than control group (P < 0.05). Both CC and TC' + CC frequencies of APOA5 -1131 T > C and APOC3 -455 T > C in case group were higher compared to control group (both P < 0.05). Additionally, T allele frequencies of the two SNPs in case group were lower than control group, while C allele in case group has higher frequencies compared to control group (both P < 0.05). The results of meta-analysis under allele and dominant models showed that APOA5 -1131 T > C and APOC3 -455 T > C SNPs are likely to increase the risk of CHD (both P < 0.05). APOA5 -1131 T > C and APOC3 -455 T > C SNPs may play potent roles in the development and progression of CHD. Show less
📄 PDF DOI: 10.1186/s12944-015-0110-6
APOA5