👤 E Kobayashi

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66
Articles
56
Name variants
Also published as: Akie Kobayashi, Akira Kobayashi, Atsuo Kobayashi, Atsushi Kobayashi, Chihiro Kobayashi, Chizuru Kobayashi, Eiichi Kobayashi, Eiji Kobayashi, Hanako Kobayashi, Hirofumi Kobayashi, Hiroki Kobayashi, Kazuki Kobayashi, Kazuya Kobayashi, Keiko Kobayashi, Kenta Kobayashi, Kenya Kobayashi, Mamiko Kobayashi, Masahiko Kobayashi, Masaki Kobayashi, Masao Kobayashi, Masaru Kobayashi, Masashi Kobayashi, Mikiko Kobayashi, Mikio Kobayashi, Miyuki Kobayashi, Momoko Kobayashi, Naohiko Kobayashi, Naohiro Kobayashi, Naoki Kobayashi, Natsumi Kobayashi, Nobuhiko Kobayashi, R Kobayashi, Rina Kobayashi, Ryo Kobayashi, Ryosuke Kobayashi, Ryota Kobayashi, S Kobayashi, Sakurako Kobayashi, Shota Kobayashi, Shotai Kobayashi, Shuken Kobayashi, Shunsuke Kobayashi, Sohei Kobayashi, Susumu Kobayashi, T Kobayashi, Takeshi Kobayashi, Taku Kobayashi, Takuya Kobayashi, Tatsuya Kobayashi, Tetsuya Kobayashi, Tomoe Kobayashi, Toshihide Kobayashi, Yoshifumi Kobayashi, Yuka Kobayashi, Yuki Kobayashi
articles
Yuko Sugihara-Mizuno, Makoto Adachi, Yuka Kobayashi +5 more · 2007 · Genes to cells : devoted to molecular & cellular mechanisms · Blackwell Publishing · added 2026-04-24
We have previously shown that MUPP1, which has an MRE domain and 13 PDZ domains, is expressed in epithelial cells and localize at tight junctions (TJs) and apical membranes. Using yeast two-hybrid scr Show more
We have previously shown that MUPP1, which has an MRE domain and 13 PDZ domains, is expressed in epithelial cells and localize at tight junctions (TJs) and apical membranes. Using yeast two-hybrid screening, we found here that MUPP1 interacts with angiomotin (Amot), JEAP/Amot-like 1 and MASCOT/Amot-like 2, which we refer to as Amot/JEAP family proteins. PDZ2 and -3 were responsible for MUPP1's interaction with Amot and MASCOT, whereas only PDZ3 was responsible for its interaction with JEAP. All the Amot/JEAP family proteins also interacted with Patj, a close relative of MUPP1. The C-terminal PDZ-binding motives of the Amot/JEAP family were required for these interactions. We successfully generated specific antibodies for these proteins and analyzed the endogenous molecular properties of the family in parallel. Immunofluorescence microscopy of cultured epithelial cells showed that in subcellular distribution, the Amot/JEAP family proteins were indistinguishable; they were apparent at TJs as well as apical membranes, and mostly co-localized with MUPP1. They were also located at TJs in several mouse tissues, but each protein showed a distinct tissue distribution. In biochemical fractionation assays, the Amot/JEAP family behaved not as transmembrane but as peripheral membrane proteins. Unexpectedly, the PDZ-binding motives were not necessarily required for their localization to TJs, and dominant negative MUPP1 or Patj did not affect the localization of Amot/JEAP family proteins, suggesting that the interaction with MUPP1/Patj is not necessarily responsible for their proper subcellular distribution. Show less
no PDF DOI: 10.1111/j.1365-2443.2007.01066.x
PATJ
Toru Nabika, Shampa Nasreen, Shotai Kobayashi +1 more · 2002 · Atherosclerosis · Elsevier · added 2026-04-24
The newly identified apoprotein AV (apoAV) gene was suggested to have a significant effect on triglyceride (TG) metabolism in Caucasians. We studied the genetic effect of this gene on serum TG in a Ja Show more
The newly identified apoprotein AV (apoAV) gene was suggested to have a significant effect on triglyceride (TG) metabolism in Caucasians. We studied the genetic effect of this gene on serum TG in a Japanese population. Participants (481 male and 412 female) were recruited at a health examination. A T/C single nucleotide polymorphism called SNP3 in the 5'-region of the apoAV gene was genotyped as described previously. The frequency of the C allele was much greater in Japanese than in Caucasians (0.34 vs. 0.08). The serum TG level in subjects with the TT genotype was significantly lower than the level in those with TC/CC (1.10, 1.25 and 1.21 mmol/l for TT, TC and CC, respectively, P=0.0003 by ANOVA), while there were no significant differences either in the serum total cholesterol or the low- and high-density lipoprotein cholesterol levels among the three genotypes. Multiple regression analysis indicated that SNP3 had a significant independent effect on the serum TG level in Japanese (P<0.0001). This result indicates that polymorphism in the apoAV gene influence serum TG in populations of different ethnicities. Show less
no PDF DOI: 10.1016/s0021-9150(02)00252-6
APOA5
S Kobayashi, K Morimoto, T Shimizu +3 more · 2000 · Biochemical and biophysical research communications · added 2026-04-24
We prepared the specific antibodies for EXT1 and EXT2, hereditary multiple exostoses (HME) gene products, and characterized their expression, subcellular localization, and protein association among EX Show more
We prepared the specific antibodies for EXT1 and EXT2, hereditary multiple exostoses (HME) gene products, and characterized their expression, subcellular localization, and protein association among EXT members. Biochemical analyses indicate that EXT1 and EXT2 can associate and form homo/hetero-oligomers in vivo with or without HME-linked mutations, EXT1 (R340C) and EXT2 (D227N), when exogenously expressed in COS-7 cells. An immunocytochemical analysis showed that both EXT1 and EXT2 localized in Golgi apparatus, irrespective of HME mutations. An immunohistochemical analysis on developing bones further showed that both EXT1 and EXT2 were concomitantly expressed in hypertrophic chondrocytes of forelimb bones from 1-day-old neonatal mouse, but down-regulated in maturing chondrocytes of developing cartilage from 21-day-old mouse. Taken together with the recent finding that EXTs encode for the glycosyltransferase required for the synthesis of heparan sulfate [Lind, T., Tufaro, F., McCormick, C., Lindahl, U., and Lindholt, K. (1998) J. Biol. Chem. 273, 26265-26268], our results implied a molecular basis that a HME-linked mutation found in EXT genes could interfere the physiological function(s) of EXT homo/hetero-oligomers as glycosyltransferases in the developing bones of HME patients. Show less
no PDF DOI: 10.1006/bbrc.2000.2219
EXT1
Y Ho, M Costanzo, L Moore +2 more · 1999 · Molecular and cellular biology · added 2026-04-24
In Saccharomyces cerevisiae, gene expression in the late G(1) phase is activated by two transcription factors, SBF and MBF. SBF contains the Swi4 and Swi6 proteins and activates the transcription of G Show more
In Saccharomyces cerevisiae, gene expression in the late G(1) phase is activated by two transcription factors, SBF and MBF. SBF contains the Swi4 and Swi6 proteins and activates the transcription of G(1) cyclin genes, cell wall biosynthesis genes, and the HO gene. MBF is composed of Mbp1 and Swi6 and activates the transcription of genes required for DNA synthesis. Mbp1 and Swi4 are the DNA binding subunits for MBF and SBF, while the common subunit, Swi6, is presumed to play a regulatory role in both complexes. We show that Stb1, a protein first identified in a two-hybrid screen with the transcriptional repressor Sin3, binds Swi6 in vitro. The STB1 transcript was cell cycle periodic and peaked in late G(1) phase. In vivo accumulation of Stb1 phosphoforms was dependent on CLN1, CLN2, and CLN3, which encode G(1)-specific cyclins for the cyclin-dependent kinase Cdc28, and Stb1 was phosphorylated by Cln-Cdc28 kinases in vitro. Deletion of STB1 caused an exacerbated delay in G(1) progression and the onset of Start transcription in a cln3Delta strain. Our results suggest a role for STB1 in controlling the timing of Start transcription that is revealed in the absence of the G(1) regulator CLN3, and they implicate Stb1 as an in vivo target of G(1)-specific cyclin-dependent kinases. Show less
no PDF DOI: 10.1128/MCB.19.8.5267
CLN3
A R Willems, S Lanker, E E Patton +6 more · 1996 · Cell · Elsevier · added 2026-04-24
In budding yeast, cell division is initiated in late G1 phase once the Cdc28 cyclin-dependent kinase is activated by the G1 cyclins Cln1, Cln2, and Cln3. The extreme instability of the Cln proteins co Show more
In budding yeast, cell division is initiated in late G1 phase once the Cdc28 cyclin-dependent kinase is activated by the G1 cyclins Cln1, Cln2, and Cln3. The extreme instability of the Cln proteins couples environmental signals, which regulate Cln synthesis, to cell division. We isolated Cdc53 as a Cln2-associated protein and show that Cdc53 is required for Cln2 instability and ubiquitination in vivo. The Cln2-Cdc53 interaction, Cln2 ubiquitination, and Cln2 instability all depend on phosphorylation of Cln2. Cdc53 also binds the E2 ubiquitin-conjugating enzyme, Cdc34. These findings suggest that Cdc53 is a component of a ubiquitin-protein ligase complex that targets phosphorylated G1 cyclins for degradation by the ubiquitin-proteasome pathway. Show less
no PDF DOI: 10.1016/s0092-8674(00)80118-x
CLN3
E Kobayashi, M Tachibana, H Ikadai +2 more · 1992 · Mammalian genome : official journal of the International Mammalian Genome Society · Springer · added 2026-04-24
no PDF DOI: 10.1007/BF00352485
APOC3