👤 Leyao Han

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556
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399
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Also published as: A Reum Han, Ae Ra Han, B Han, Baek Soo Han, Baek-Soo Han, Bao-Xia Han, Baohui Han, Baosheng Han, Bateer Han, Beom Seok Han, Bing Han, Bingbing Han, Bingchen Han, Bingqian Han, Bingqiang Han, Bingqing Han, Bo Han, Bok-Ghee Han, Bong-Kwan Han, Buhm Han, Buying Han, Byung Woo Han, C Han, Cailing Han, Chang Yeob Han, Changwoo Han, Chao Han, Chen-Jun Han, Chong Han, Chuangye Han, Chun Han, Chun-Hao Han, Chunchun Han, Chunsheng Han, Chunyan Han, Cong Han, Dai Hoon Han, Dan Han, Dandan Han, Daniel Han, David K Han, De-Min Han, Deping Han, Dohyun Han, Dong Han, Dong-Ji Han, Dongbo Han, Edric Han, Eon Chul Han, Eric C Han, Fang Han, Fanghai Han, Fei Han, Feihuang Han, Feng Han, Fucong Han, Fuxin Han, Gang Han, Guang Han, Guangsen Han, Guangyue Han, Guo Han, Guofeng Han, Guoge Han, Gye Won Han, Gyoonhee Han, Hai-Hui Han, Haige Han, Haihui Han, Haijun Han, Hailong Han, Hairui Han, Haiying Han, Haiyong Han, Han Han, Hao-Wei Han, Haobo Han, Ho Jae Han, Ho-jae Han, Hongbing Han, Hua Han, Huazhong Han, Hui Han, Hui-Qin Han, HyeRim Han, Ian Han, Inbo Han, Inn-Oc Han, J Han, Jae Ho Han, Jaeho Han, Jeong Pil Han, Jeongho Han, Jeung-Whan Han, Ji Won Han, Jiale Han, Jiali Han, Jian Han, Jian-Lin Han, Jiancheng Han, Jianfang Han, Jiangyan Han, Jianmin Han, Jiannan Han, Jianyong Han, Jiaqi Han, Jie Han, Jiehua Han, Jieun Han, Jihong Han, Jihoon Han, Jimin Han, Jin Han, Jin-Kwan Han, JinKwan Han, Jinah Han, Jing Han, Jing-Yan Han, Jing-wen Han, Jingchun Han, Jingdong Han, Jingjing Han, Jingya Han, Jinxiang Han, Jinyi Han, Jiyeon Han, Joan C Han, Jonghee Han, Joon Sang Han, Juan Han, Juan-Ping Han, Jun Han, Jung-Hwa Han, Jung-Youn Han, Junhong Han, Junkyu Han, Junlei Han, Junshu Han, Junxia Han, Junying Han, Junyong Han, Kaiyue Han, Ke-Jun Han, Ki Hoon Han, Ki-Hwan Han, Kunhee Han, Kwang-Hyub Han, Kyu-Man Han, Kyudong Han, Kyuhyung Han, L Q Han, Lanwen Han, Lei Han, Leng Han, Li Han, Liang Han, Lijuan Han, Limin Han, Lin Han, Ling Han, Ling-Ling Han, Linyu Han, Linzhi Han, Liping Han, Liqiang Han, Liqiao Han, Liu Han, Liwen Han, Liyuan Han, Liyun Han, Lu Han, Lulu Han, Maosen Han, Mariana Lee Han, Mei Han, Meizi Han, Mengxue Han, Mi Hwa Han, Mi-Hwa Han, Mi-Ryung Han, Miao Han, Miaoceng Han, Min Han, Min Ji Han, Ming-Ming Han, Mingda Han, Mingming Han, Mingshan Han, Mingzhi Han, Moshage Han, Myoung-Eun Han, Myung-Ki Han, Na Han, Nian Han, Nicholas A Han, Peidong Han, Peng Han, Ping Han, Qi Han, Qian Han, Qiang Han, Qiangqiang Han, Qianhe Han, Qing Han, Qing-hua Han, Qingdong Han, Qingfang Han, Qinghua Han, Qingjian Han, Qingsong Han, Qiuying Han, Quanhong Han, Renzhi Han, Rong Han, Rui Han, Ruili Han, Ruilian Han, Ruo-An Han, S Han, Sae-Won Han, Sangdon Han, Sanghwa Han, Se Jong Han, Seon-Young Han, Seung Hwan Han, Seung-Yun Han, Seunghoon Han, Shan Han, Shangting Han, Shangzhe Han, Shaoshan Han, Shen Han, Sheng Han, Shengbo Han, Shilong Han, Shisheng Han, Shiyu Han, Shizhong Han, Shoumeng Han, Shuai Han, Shufen Han, Shuhong Han, Shuhua Han, Shulei Han, Shuyan Han, Si-Yin Han, Song Iy Han, Song-Iee Han, Songling Han, Sukmin Han, Sun-Ho Han, Sung Nim Han, Sung Woo Han, Sunhee Han, Susu Han, Tae Hee Han, Tae-Su Han, Tian-Quan Han, Tian-Tian Han, Tianjiao Han, Tianting Han, Tianyu Han, Tingli Han, Tingting Han, Tong Han, Tonglei Han, Tun Han, Velda X Han, Wanlin Han, Wei Han, Weidong Han, Wen-Ching Han, Wen-Ping Han, Wenyan Han, Wenyi Han, WonHee Han, Woong Kyu Han, X Han, Xiangyu Han, Xianlin Han, Xiao Han, Xiao-Yong Han, Xiao-You Han, Xiao-Yu Han, Xiaobin Han, Xiaodan Han, Xiaodi Han, Xiaodong Han, Xiaofei Han, Xiaohong Han, Xiaojiao Han, Xiaojuan Han, Xiaolei Han, Xiaoli Han, Xiaoping Han, Xiaorui Han, Xiaowan Han, Xiaoxu Han, Xiaoyan Han, Xiaoying Han, Xiaoyu Han, Xiaying Han, Xijing Han, Ximei Han, Ximing Han, Xinghua Han, Xingping Han, Xingtao Han, Xinli Han, Xinwei Han, Xinyu Han, Xitong Han, Xiuli Han, Xiurui Han, Xu Han, Xue Han, Xuefeng Han, Xuejiao Han, Xuelei Han, Xuelian Han, Xuemei Han, Xueyuan Han, Xumeng Han, Y K Han, Ya Han, Yabo Han, Yafan Han, Yaguang Han, Yaling Han, Yan Han, Yanbing Han, Yang Han, Yanguo Han, Yangyang Han, Yanting Han, Yanxinli Han, Yanyan Han, Yapeng Han, Yaxin Han, Ye-Chen Han, Yi Han, Ying Han, Ying-Hao Han, Yingbo Han, Yingying Han, Yinru Han, Yiwei Han, Yiwen Han, Yixing Han, Yixuan Han, Yong Han, Yong-Hui Han, Yongli Han, Yonglong Han, Yongzheng Han, Young Joon Han, Young-Eun Han, Young-Hoon Han, Young-Hyun Han, Yu Han, Yuanhang Han, Yuanyuan Han, Yubo Han, Yuchen Han, Yuchi Han, Yue Han, Yuefeng Han, Yufei Han, Yujiao Han, Yuli Han, Yun Kyung Han, Yunfei Han, Yunwei Han, Yuping Han, Yuqing Han, Yusheng Han, Yusong Han, Yutong Han, Yuxin Han, Yuxuan Han, Zay Yar Han, Zebei Han, Zhanying Han, Zhao Han, Zhaodong Han, Zhe Han, Zhengxue Han, Zhengyu Han, Zhenzhong Han, Zhi Han, Zhihua Han, Zhouzhen Han, Zhuo Han, Zhuo-Jun Han, Zhuoran Han, Ziwu Han, Ziyan Han, Ziyin Han
articles
Hwajin Jung, Hyun Joon Kim, Suk Kyung Lee +4 more · 2009 · Experimental & molecular medicine · added 2026-04-24
Wnt signaling is known to be important for diverse embryonic and post-natal cellular events and be regulated by the proteins Dishevelled and Axin. Although Dishevelled is activated by Wnt and involved Show more
Wnt signaling is known to be important for diverse embryonic and post-natal cellular events and be regulated by the proteins Dishevelled and Axin. Although Dishevelled is activated by Wnt and involved in signal transduction, it is not clear how Dishevelled-mediated signaling is turned off. We report that guanine nucleotide binding protein beta 2 (Gnb2; Gbeta2) bound to Axin and Gbeta2 inhibited Wnt mediated reporter activity. The inhibition involved reduction of the level of Dishevelled, and the Gbeta2gamma2 mediated reduction of Dishevelled was countered by increased expression of Axin. Consistent with these effects in HEK293T cells, injection of Gbeta2gamma2 into Xenopus embryos inhibited the formation of secondary axes induced either by XWnt8 or Dishevelled, but not by beta-catenin. The DEP domain of Dishevelled is necessary for both interaction with Gbeta2gamma2 and subsequent degradation of Dishevelled via the lysosomal pathway. Signaling induced by Gbeta2gamma2 is required because a mutant of Gbeta2, Gbeta2 (W332A) with lower signaling activity, had reduced ability to downregulate the level of Dishevelled. Activation of Wnt signaling by either of two methods, increased Frizzled signaling or transient transfection of Wnt, also led to increased degradation of Dishevelled and the induced Dishevelled loss is dependent on Gbeta1 and Gbeta2. Other studies with agents that interfere with PLC action and calcium signaling suggested that loss of Dishevelled is mediated through the following pathway: Wnt/Frizzled-->Gbetagamma-->PLC-->Ca(+2)/PKC signaling. Together the evidence suggests a novel negative feedback mechanism in which Gbeta2gamma2 inhibits Wnt signaling by degradation of Dishevelled. Show less
no PDF DOI: 10.3858/emm.2009.41.10.076
AXIN1
Z X Meng, J Nie, J J Ling +7 more · 2009 · Diabetologia · Springer · added 2026-04-24
Liver X receptors (LXRs) are important transcriptional regulators of lipid homeostasis and proliferation in several cell types. However, the roles of LXRs in pancreatic beta cells have not been fully Show more
Liver X receptors (LXRs) are important transcriptional regulators of lipid homeostasis and proliferation in several cell types. However, the roles of LXRs in pancreatic beta cells have not been fully established. The aim of this study was to investigate the effects of LXRs on pancreatic beta cell proliferation. Gene expression was analysed using real-time RT-PCR. Transient transfection and reporter gene assays were used to determine the transcriptional activity of LXRs in pancreatic beta cells. Cell viability and proliferation were analysed using 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT), DNA fluorometric, BrdU labelling and [(3)H]thymidine incorporation assays. Cell cycle distribution was investigated by flow cytometry analysis. Adenovirus-based RNA interference was used to knockdown LXRalpha, LXRbeta and p27 in MIN6 cells and mouse islets. We found that both Lxralpha (also known as Nr1h3) and Lxrbeta (also known as Nr1h2) were expressed and transactivated the LXR response element in HIT-T15 and MIN6 cells. Activation of LXRs dose-dependently inhibited pancreatic beta cell viability and proliferation. This was accompanied by beta cell cycle arrest at the G1 phase. Furthermore, LXR activation increased levels of the p27 protein by inhibiting its degradation. Knockdown of p27 reversed these effects of LXR activation on growth inhibition and cell cycle arrest. Our observations indicate that LXR activation inhibits pancreatic beta cell proliferation through cell cycle arrest. A well-known regulator of pancreatic beta cell cycle progression, p27, is upregulated and mediates the effects of LXRs on growth inhibition in beta cells. These observations suggest the involvement of aberrant activation of LXR in beta cell mass inadequacy, which is an important step in the development of type 2 diabetes. Show less
no PDF DOI: 10.1007/s00125-008-1174-x
NR1H3
Dae Hoon Jeong, Hyoung Kyu Kim, Abd-Ei Bary Prince +4 more · 2008 · Journal of gynecologic oncology · added 2026-04-24
To compare plasma protein expression between patients with squamous cell carcinoma (SCC) of the cervix and normal controls. Plasma samples from patients with benign gynecological disease (normal cervi Show more
To compare plasma protein expression between patients with squamous cell carcinoma (SCC) of the cervix and normal controls. Plasma samples from patients with benign gynecological disease (normal cervix, n=6) and cervical cancer (SCC, n=6) were subjected to plasma proteomic analysis using two dimensional gel electrophoresis (2-DE) and matrix-assisted laser desorption/ionization mass spectroscopy (MALDI-MS). Western blotting and immunoturbidimetric assay were performed to validate the results of 2-DE. Eight proteins showed differential expression between controls and SCC patients; six (ceruloplasmin, complement C3, afamin precursor, alpha-1-B-glycoprotein, transferrin, alpha-fibrinogen precursor) were up-regulated, while two (chain A, crystal structure of antithrombin and apolipoprotein A-IV precursor) were down-regulated in the plasma of SCC patients. Western blotting analysis revealed significant elevation of ceruloplasmin, complement C3, afamin, and alpha-1-B-glycoprotein in the plasma of SCC patients in comparison to controls. Immunoturbidimetric assay of a larger group confirmed the results of 2-DE and Western blotting, and showed that ceruloplasmin and complement C3 were significantly elevated in the plasma of SCC patients in comparison with controls and patients with carcinoma in situ (CIS) of the uterine cervix. Plasma protein expression determined using 2-DE and MALDI-MS will give a chance to identify tumor-specific biomarkers for SCC of the cervix. Show less
no PDF DOI: 10.3802/jgo.2008.19.3.173
APOA4
Jun Wang, De-Min Han, Hong-Wei Kang +3 more · 2008 · Zhonghua er bi yan hou tou jing wai ke za zhi = Chinese journal of otorhinolaryngology head and neck surgery · added 2026-04-24
To compare the molecular basis difference between recurrent respiratory papillomatosis (RRP) and vocal cord polyp, to analyze the expression of glycan structural genes, and to discuss the pathopoiesis Show more
To compare the molecular basis difference between recurrent respiratory papillomatosis (RRP) and vocal cord polyp, to analyze the expression of glycan structural genes, and to discuss the pathopoiesis mechanism of RRP. The gene expressing profile between the 3 groups papilloma and the vocal cord polyp regarded as normal larynx epithelium were compared using mRNA parallel amplify and the human genome gene expressing microarray. Through cluster analysis, Gene Ontology function gene annotation and path way analysis, the relative gene of RRP and HPV infection were acquired. According to three microarrays results, total 567 expression changed genes related to HPV induce RRP were acquired. A serial change of glycan structure biosynthesis and degradation pathways was significant. The expression of dolichyl-phosphate mannosyltransferase polypeptide 1 (DPM1), asparagine-linked glycosylation 1 homolog (ALG1), fucosyltransferase 8 (FUT8) and alpha-mannosidase 1A (MAN1A) were regulated and beta-hexosaminidase (HEXB), beta1-galactosidase (GLB1), exostoses 1 (EXT1), fucosyltransferase (FUT) reduced expression and heparan sulfate 3-O-sulfotransferase 1 (HS3ST3A1) increased expression. The two related enzymes of the glycosphingolipids which is the main composed of the cell membrane, beta-3-N-acetylglucosaminyltransferase 4 (B3GNT4) and UDP-glucose ceramide glucosyltransferase (UGCG) increase expression, HEXB and GLB1 reduced expression. The alteration of the coding genes of glycan structure biosynthesis and degradation pathways were significantly and characteristically in pathopoiesis mechanism of RRP. This abnormality may be the beginning of tumor form HPV infection. Show less
no PDF
EXT1
Xiaoye Zhou, Wei He, Zhiping Huang +3 more · 2008 · The Journal of biological chemistry · American Society for Biochemistry and Molecular Biology · added 2026-04-24
Low density lipoprotein receptor (LDLR) mutations cause familial hypercholesterolemia and early atherosclerosis. ABCA1 facilitates free cholesterol efflux from peripheral tissues. We investigated the Show more
Low density lipoprotein receptor (LDLR) mutations cause familial hypercholesterolemia and early atherosclerosis. ABCA1 facilitates free cholesterol efflux from peripheral tissues. We investigated the effects of LDLR deletion (LDLR(-/-)) on ABCA1 expression. LDLR(-/-) macrophages had reduced basal levels of ABCA1, ABCG1, and cholesterol efflux. A high fat diet increased cholesterol in LDLR(-/-) macrophages but not wild type cells. A liver X receptor (LXR) agonist induced expression of ABCA1, ABCG1, and cholesterol efflux in both LDLR(-/-) and wild type macrophages, whereas expression of LXRalpha or LXRbeta was similar. Interestingly, oxidized LDL induced more ABCA1 in wild type macrophages than LDLR(-/-) cells. LDL induced ABCA1 expression in wild type cells but inhibited it in LDLR(-/-) macrophages in a concentration-dependent manner. However, lipoproteins regulated ABCG1 expression similarly in LDLR(-/-) and wild type macrophages. Cholesterol or oxysterols induced ABCA1 expression in wild type macrophages but had little or inhibitory effects on ABCA1 expression in LDLR(-/-) macrophages. Active sterol regulatory element-binding protein 1a (SREBP1a) inhibited ABCA1 promoter activity in an LXRE-dependent manner and decreased both macrophage ABCA1 expression and cholesterol efflux. Expression of ABCA1 in animal tissues was inversely correlated to active SREBP1. Oxysterols inactivated SREBP1 in wild type macrophages but not in LDLR(-/-) cells. Oxysterol synergized with nonsteroid LXR ligand induced ABCA1 expression in wild type macrophages but blocked induction in LDLR(-/-) cells. Taken together, our studies suggest that LDLR is critical in the regulation of cholesterol efflux and ABCA1 expression in macrophage. Lack of the LDLR impairs sterol-induced macrophage ABCA1 expression by a sterol regulatory element-binding protein 1-dependent mechanism that can result in reduced cholesterol efflux and lipid accumulation in macrophages under hypercholesterolemic conditions. Show less
no PDF DOI: 10.1074/jbc.M706636200
NR1H3
Zhao-Yan Jiang, Paolo Parini, Gösta Eggertsen +7 more · 2008 · Journal of lipid research · added 2026-04-24
Cholesterol supersaturation of bile is one prerequisite for gallstone formation. In the present study of Chinese patients with gallstones, we investigated whether this phenomenon was correlated with t Show more
Cholesterol supersaturation of bile is one prerequisite for gallstone formation. In the present study of Chinese patients with gallstones, we investigated whether this phenomenon was correlated with the hepatic expression of genes participating in the metabolism of cholesterol and bile acids. Twenty-two nonobese, normolipidemic patients (female-male, 11:11) with gallstones were investigated with 13 age- and body mass index-matched gallstone-free controls (female-male, 10:3). The bile from the gallstone patients had higher cholesterol saturation than that from the controls. The mRNA levels of ABCG5, ABCG8, and liver X receptor alpha (LXRalpha) in the gallstone patients were increased by 51, 59, and 102%, respectively, and significantly correlated with the molar percentage of biliary cholesterol and cholesterol saturation index (CSI). The mRNA and protein levels of the hepatic scavenger receptor class B type I (SR-BI) were increased, and a significant correlation was found between the protein levels and the CSI. No differences were recorded between the two groups concerning the hepatic synthesis of cholesterol, bile acids, and esterification of cholesterol. Our results suggest that the upregulation of ABCG5/ABCG8 in gallstone patients, possibly mediated by increased LXRalpha, may contribute to the cholesterol supersaturation of bile. Our data are consistent with the possibility that increased amounts of biliary cholesterol may originate from plasma HDL cholesterol by enhanced transfer via SR-BI. Show less
no PDF DOI: 10.1194/jlr.M700295-JLR200
NR1H3
David Ng, Nan Hu, Ying Hu +8 more · 2008 · International journal of cancer · Wiley · added 2026-04-24
In a previous pilot case-control study of individuals diagnosed with esophageal squamous cell carcinoma (ESCC) and matched controls from a high-risk area in China, we identified 38 single nucleotide p Show more
In a previous pilot case-control study of individuals diagnosed with esophageal squamous cell carcinoma (ESCC) and matched controls from a high-risk area in China, we identified 38 single nucleotide polymorphisms (SNPs) associated with ESCC located in or near one of 33 genes. In our study, we attempted to replicate the results of these 38 gene-related SNPs in a new sample of 300 ESCC cases and 300 matched controls from the same study conducted in Shanxi Province, China. Among 36 evaluable SNPs, 4 were significant in one or more analyses, including SNPs located in EPHB1, PGLYRP2, PIK3C3 and SLC9A9, although the odds ratios (ORs) for these genotypes were modest. Associations were found with EPHB1/rs1515366 (OR 0.92, 95% CI 0.86-0.99; p = 0.019), PIK3C3/rs52911 (OR 0.93, 95% CI 0.88-0.99; p = 0.02) and PGLYRP2/rs959117 (OR 0.93, 95% CI, 0.86-1.01; p = 0.061) in general linear models (additive mode); and the genotype distribution differed between cases and controls for SLC9A9/rs956062 (p = 0.024). To examine these 4 genes in more detail, 40 HapMap-based tag SNPs from these 4 genes were evaluated in the same subjects and 7 additional SNPs associated with ESCC were identified. Further confirmation of these findings in other populations and other studies are needed to determine if the signals from these SNPs are indirectly associated due to linkage disequilibrium, or are directly related to biologic function and the development of ESCC. Show less
no PDF DOI: 10.1002/ijc.23682
PIK3C3
Brian E Fink, Ashvinikumar V Gavai, John S Tokarski +11 more · 2006 · Bioorganic & medicinal chemistry letters · Elsevier · added 2026-04-24
A novel series of 17beta-hydroxysteroid dehydrogenase type 3 (17beta-HSD3) inhibitors has been identified. These inhibitors, based on a dibenzazocine core, exhibited picomolar to low nanomolar inhibit Show more
A novel series of 17beta-hydroxysteroid dehydrogenase type 3 (17beta-HSD3) inhibitors has been identified. These inhibitors, based on a dibenzazocine core, exhibited picomolar to low nanomolar inhibition of 17beta-HSD3 in cell-free enzymatic as well as in cell-based transcriptional reporter assays. Show less
no PDF DOI: 10.1016/j.bmcl.2005.12.039
HSD17B12
Yan Sun, Jiajun Shi, Sizhong Zhang +6 more · 2005 · Neuroscience letters · Elsevier · added 2026-04-24
In order to clarify the relationship of apolipoprotein CIII (APOC3) polymorphism and sporadic Alzheimer's disease (AD) in Chinese, 165 sporadic AD patients and 174 age-matched elderly individuals were Show more
In order to clarify the relationship of apolipoprotein CIII (APOC3) polymorphism and sporadic Alzheimer's disease (AD) in Chinese, 165 sporadic AD patients and 174 age-matched elderly individuals were genotyped for the APOC3 SstI and apolipoprotein E (APOE) HhaI polymorphisms. As the result, the APOC3 3017G allele was found to be associated with AD in APOE epsilon4 allele noncarriers (chi2=4.433, P=0.035), and the risk estimate of allele C versus G resulted in an OR of 1.56 (95% CI: 1.03-2.37), although in total no significant differences of allelic or genotypic frequencies between patients and controls were found. Assessment of interaction between APOE epsilon4 and APOC3 3017G status presented an adjusted odds ratio of 0.62 (95% CI: 0.37-1.03) with a borderline significant P-value (P=0.066). Therefore, we conclude that the rare APOC3 G allele may offer some protection against the development of sporadic AD in APOE epsilon4 noncarriers in Chinese. Show less
no PDF DOI: 10.1016/j.neulet.2005.01.038
APOC3
Bong-Kwan Han, Lydia M Bogomolnaya, James M Totten +3 more · 2005 · Genes & development · Cold Spring Harbor Laboratory · added 2026-04-24
How proliferating cells maintain the copy number and overall size of their organelles is not clear. We had previously reported that in the budding yeast Saccharomyces cerevisiae the G1 cyclin Cln3p is Show more
How proliferating cells maintain the copy number and overall size of their organelles is not clear. We had previously reported that in the budding yeast Saccharomyces cerevisiae the G1 cyclin Cln3p is required for vacuolar (lysosomal) homotypic fusion and loss of Cln3p leads to vacuolar fragmentation. The Cdc42p GTPase is also required for vacuole fusion. Here we show that the scaffold protein Bem1p, a critical regulator of Cdc42p activity, is a downstream effector of Cln3p and the cyclin-dependent kinase (Cdk) Cdc28p. Our results suggest that Bem1p is phosphorylated in a Cdk-dependent manner to promote vacuole fusion. Replacing Ser72 with Asp, to mimic phosphorylation at an optimal Cdk-consensus site located in the first SH3 domain of Bem1p, suppressed vacuolar fragmentation in cells lacking Cln3p. Using in vivo and in vitro assays, we found that Cln3p was unable to promote vacuole fusion in the absence of Bem1p or in the presence of a nonphosphorylatable Bem1p-Ser72Ala mutant. Furthermore, activation of Cdc42p also suppressed vacuolar fragmentation in the absence of Cln3p. Our results provide a mechanism that links cyclin-dependent kinase activity with vacuole fusion through Bem1p and the Cdc42p GTPase cycle. Show less
no PDF DOI: 10.1101/gad.1361505
CLN3
Nan Hu, Chaoyu Wang, Ying Hu +9 more · 2005 · Cancer research · added 2026-04-24
Whole genome association studies of complex human diseases represent a new paradigm in the postgenomic era. In this study, we report application of the Affymetrix, Inc. (Santa Clara, CA) high-density Show more
Whole genome association studies of complex human diseases represent a new paradigm in the postgenomic era. In this study, we report application of the Affymetrix, Inc. (Santa Clara, CA) high-density single nucleotide polymorphism (SNP) array containing 11,555 SNPs in a pilot case-control study of esophageal squamous cell carcinoma (ESCC) that included the analysis of germ line samples from 50 ESCC patients and 50 matched controls. The average genotyping call rate for the 100 samples analyzed was 96%. Using the generalized linear model (GLM) with adjustment for potential confounders and multiple comparisons, we identified 37 SNPs associated with disease, assuming a recessive mode of transmission; similarly, 48 SNPs were identified assuming a dominant mode and 53 SNPs in a continuous mode. When the 37 SNPs identified from the GLM recessive mode were used in a principal components analysis, the first principal component correctly predicted 46 of 50 cases and 47 of 50 controls. Among all the SNPs selected from GLMs for the three modes of transmission, 39 could be mapped to 1 of 33 genes. Many of these genes are involved in various cancers, including GASC1, shown previously to be amplified in ESCCs, and EPHB1 and PIK3C3. In conclusion, we have shown the feasibility of the Affymetrix 10K SNP array in genome-wide association studies of common cancers and identified new candidate loci to study in ESCC. Show less
no PDF DOI: 10.1158/0008-5472.CAN-04-3247
PIK3C3
Chun Han, Tatyana Y Belenkaya, Marat Khodoun +3 more · 2004 · Development (Cambridge, England) · added 2026-04-24
Heparan sulfate proteoglycans (HSPG) have been implicated in regulating the signalling activities of secreted morphogen molecules including Wingless (Wg), Hedgehog (Hh) and Decapentaplegic (Dpp). HSPG Show more
Heparan sulfate proteoglycans (HSPG) have been implicated in regulating the signalling activities of secreted morphogen molecules including Wingless (Wg), Hedgehog (Hh) and Decapentaplegic (Dpp). HSPG consists of a protein core to which heparan sulfate (HS) glycosaminoglycan (GAG) chains are attached. The formation of HS GAG chains is catalyzed by glycosyltransferases encoded by members of the EXT family of putative tumor suppressors linked to hereditary multiple exostoses. Previous studies in Drosophila demonstrated that tout-velu (ttv), the Drosophila EXT1, is required for Hh movement. However, the functions of other EXT family members are unknown. We have identified and isolated the other two members of the Drosophila EXT family genes, which are named sister of tout-velu (sotv) and brother of tout-velu (botv), and encode Drosophila homologues of vertebrate EXT2 and EXT-like 3 (EXTL3), respectively. We show that both Hh and Dpp signalling activities, as well as their morphogen distributions, are defective in cells mutant for ttv, sotv or botv in the wing disc. Surprisingly, although Wg morphogen distribution is abnormal in ttv, sotv and botv, Wg signalling is only defective in botv mutants or ttv-sotv double mutants, and not in ttv nor sotv alone, suggesting that Ttv and Sotv are redundant in Wg signalling. We demonstrate further that Ttv and Sotv form a complex and are co-localized in vivo. Our results, along with previous studies on Ttv, provide evidence that all three Drosophila EXT proteins are required for the biosynthesis of HSPGs, and for the gradient formation of the Wg, Hh and Dpp morphogens. Our results also suggest that HSPGs have two distinct roles in Wg morphogen distribution and signalling. Show less
no PDF DOI: 10.1242/dev.01051
EXT1
Bong-Kwan Han, Rodolfo Aramayo, Michael Polymenis · 2003 · Genetics · Oxford University Press · added 2026-04-24
How organelle biogenesis and inheritance is linked to cell division is poorly understood. In the budding yeast Saccharomyces cerevisiae the G(1) cyclins Cln1,2,3p control initiation of cell division. Show more
How organelle biogenesis and inheritance is linked to cell division is poorly understood. In the budding yeast Saccharomyces cerevisiae the G(1) cyclins Cln1,2,3p control initiation of cell division. Here we show that Cln3p controls vacuolar (lysosomal) biogenesis and segregation. First, loss of Cln3p, but not Cln1p or Cln2p, resulted in vacuolar fragmentation. Although the vacuoles of cln3delta cells were fragmented, together they occupied a large space, which accounted for a significant fraction of the overall cell size increase in cln3delta cells. Second, cytosol prepared from cells lacking Cln3p had reduced vacuolar homotypic fusion activity in cell-free assays. Third, vacuolar segregation was perturbed in cln3delta cells. Our findings reveal a novel role for a eukaryotic G(1) cyclin in cytoplasmic organelle biogenesis and segregation. Show less
no PDF DOI: 10.1093/genetics/165.2.467
CLN3
Chunming Liu, Yiming Li, Mikhail Semenov +6 more · 2002 · Cell · Elsevier · added 2026-04-24
Wnt regulation of beta-catenin degradation is essential for development and carcinogenesis. beta-catenin degradation is initiated upon amino-terminal serine/threonine phosphorylation, which is believe Show more
Wnt regulation of beta-catenin degradation is essential for development and carcinogenesis. beta-catenin degradation is initiated upon amino-terminal serine/threonine phosphorylation, which is believed to be performed by glycogen synthase kinase-3 (GSK-3) in complex with tumor suppressor proteins Axin and adnomatous polyposis coli (APC). Here we describe another Axin-associated kinase, whose phosphorylation of beta-catenin precedes and is required for subsequent GSK-3 phosphorylation of beta-catenin. This "priming" kinase is casein kinase Ialpha (CKIalpha). Depletion of CKIalpha inhibits beta-catenin phosphorylation and degradation and causes abnormal embryogenesis associated with excessive Wnt/beta-catenin signaling. Our study uncovers distinct roles and steps of beta-catenin phosphorylation, identifies CKIalpha as a component in Wnt/beta-catenin signaling, and has implications to pathogenesis/therapeutics of human cancers and diabetes. Show less
no PDF DOI: 10.1016/s0092-8674(02)00685-2
AXIN1
X Wang, C H McGowan, M Zhao +6 more · 2000 · Molecular and cellular biology · added 2026-04-24
The p38 group of kinases belongs to the mitogen-activated protein (MAP) kinase superfamily with structural and functional characteristics distinguishable from those of the ERK, JNK (SAPK), and BMK (ER Show more
The p38 group of kinases belongs to the mitogen-activated protein (MAP) kinase superfamily with structural and functional characteristics distinguishable from those of the ERK, JNK (SAPK), and BMK (ERK5) kinases. Although there is a high degree of similarity among members of the p38 group in terms of structure and activation, each member appears to have a unique function. Here we show that activation of p38gamma (also known as ERK6 or SAPK3), but not the other p38 isoforms, is required for gamma-irradiation-induced G(2) arrest. Activation of the MKK6-p38gamma cascade is sufficient to induce G(2) arrest in cells, and expression of dominant negative alleles of MKK6 or p38gamma allows cells to escape the DNA damage-induce G(2) delay. Activation of p38gamma is dependent on ATM and leads to activation of Cds1 (also known as Chk2). These data suggest a model in which activation of ATM by gamma irradiation leads to the activation of MKK6, p38gamma, and Cds1 and that activation of both MKK6 and p38gamma is essential for the proper regulation of the G(2) checkpoint in mammalian cells. Show less
no PDF DOI: 10.1128/MCB.20.13.4543-4552.2000
MAP2K5
Y Kato, V V Kravchenko, R I Tapping +3 more · 1997 · The EMBO journal · Oxford University Press · added 2026-04-24
Big MAP kinase 1 (BMK1), also known as ERK5, is a mitogen-activated protein (MAP) kinase member whose biological role is largely undefined. We have shown previously that the activity of BMK1 in rat sm Show more
Big MAP kinase 1 (BMK1), also known as ERK5, is a mitogen-activated protein (MAP) kinase member whose biological role is largely undefined. We have shown previously that the activity of BMK1 in rat smooth muscle cells is up-regulated by oxidants. Here, we describe a constitutively active form of the MAP kinase kinase, MEK5(D), which selectively activates BMK1 but not other MAP kinases in vivo. Through utilization of MEK5(D), we have determined that a member of the MEF2 transcription factor family, MEF2C, is a protein substrate of BMK1. BMK1 dramatically enhances the transactivation activity of MEF2C by phosphorylating a serine residue at amino acid position 387 in this transcription factor. Serum is also a potent stimulator of BMK1-induced MEF2C phosphorylation, since a dominant-negative form of BMK1 specifically inhibits serum-induced activation of MEF2C. One consequence of MEF2C activation is increased transcription of the c-jun gene. Taken together, these results strongly suggest that in some cell types the MEK5/BMK1 MAP kinase signaling pathway regulates serum-induced early gene expression through the transcription factor MEF2C. Show less
no PDF DOI: 10.1093/emboj/16.23.7054
MAP2K5